ENSDARG00000036593


Danio rerio

Features
Gene ID: ENSDARG00000036593
  
Biological name :kdm2ba
  
Synonyms : kdm2ba / lysine (K)-specific demethylase 2Ba
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 40238647
Gene end: 40276193
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000152592
Ensembl peptide - ENSDARP00000154355
Ensembl peptide - ENSDARP00000053157
Ensembl peptide - ENSDARP00000131056
Ensembl peptide - ENSDARP00000150290
Ensembl peptide - ENSDARP00000151937
NCBI entrez gene - 406446     See in Manteia.
swissprot - A0A0R4IDM2
swissprot - F1QE63
ZFIN ID - ZDB-GENE-040426-2195
Ensembl - ENSDARG00000036593
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
kdm2bb / lysine (K)-specific demethylase 2Bb / KDM2B* / Q6P1G2* / Q8NHM5* / lysine demethylase 2B* / Lysine-specific demethylase 2B *ENSDARG0000004601053
kdm2ab / lysine (K)-specific demethylase 2Ab / KDM2A* / Q9Y2K7* / lysine demethylase 2A*ENSDARG0000007813329
kdm2aa / lysine (K)-specific demethylase 2Aa / KDM2A* / Q9Y2K7* / lysine demethylase 2A*ENSDARG0000005965328
btr30 / FBXL19 / zgc:158376 / Q6PCT2* / F-box and leucine rich repeat protein 19*ENSDARG0000010336227
phf2 / PHD finger protein 2 / O75151* / Q9WTU0* / Lysine-specific demethylase PHF2 *ENSDARG000000186919
phf8 / P0CH95 / PHD finger protein 8 / Q80TJ7* / Q9UPP1* / 4921501E09Rik* / RIKEN cDNA 4921501E09 gene* / Histone lysine demethylase PHF8 *ENSDARG000000065848
kdm7ab / lysine (K)-specific demethylase 7Ab / KDM7A* / Q3UWM4* / Q6ZMT4* / lysine demethylase 7A* / Lysine-specific demethylase 7A *ENSDARG000000185595
kdm7aa / Q5RHD1 / lysine (K)-specific demethylase 7Aa / PHF8* / Q80TJ7* / Q9UPP1* / 4921501E09Rik* / PHD finger protein 8* / RIKEN cDNA 4921501E09 gene* / Histone lysine demethylase PHF8 *ENSDARG000000181110


Protein motifs (from Interpro)
Interpro ID Name
 IPR001810  F-box domain
 IPR001965  Zinc finger, PHD-type
 IPR002857  Zinc finger, CXXC-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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