ENSDARG00000018691


Danio rerio

Features
Gene ID: ENSDARG00000018691
  
Biological name :phf2
  
Synonyms : PHD finger protein 2 / phf2
  
Possible biological names infered from orthology : Lysine-specific demethylase PHF2 / O75151 / Q9WTU0
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 27644524
Gene end: 27702835
  
Corresponding Affymetrix probe sets: Dr.5175.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000111663
Ensembl peptide - ENSDARP00000045941
NCBI entrez gene - 503778     See in Manteia.
RefSeq - NM_001202418
RefSeq Peptide - NP_001189347
swissprot - F6NB59
swissprot - F1Q721
ZFIN ID - ZDB-GENE-050302-10
Ensembl - ENSDARG00000018691
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PHF2ENSGALG00000039208Gallus gallus
 PHF2ENSG00000197724Homo sapiens
 Phf2ENSMUSG00000038025Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
phf8 / P0CH95 / PHD finger protein 8 / Q80TJ7* / Q9UPP1* / 4921501E09Rik* / RIKEN cDNA 4921501E09 gene* / Histone lysine demethylase PHF8 *ENSDARG0000000658444
kdm7ab / lysine (K)-specific demethylase 7Ab / KDM7A* / Q3UWM4* / Q6ZMT4* / lysine demethylase 7A* / Lysine-specific demethylase 7A *ENSDARG0000001855929
kdm2bb / lysine (K)-specific demethylase 2Bb / KDM2B* / Q6P1G2* / Q8NHM5* / lysine demethylase 2B* / Lysine-specific demethylase 2B *ENSDARG0000004601020
kdm2ab / lysine (K)-specific demethylase 2Ab / KDM2A* / Q9Y2K7* / lysine demethylase 2A*ENSDARG0000007813319
kdm2aa / lysine (K)-specific demethylase 2Aa / KDM2A* / Q9Y2K7* / lysine demethylase 2A*ENSDARG0000005965318
kdm7aa / Q5RHD1 / lysine (K)-specific demethylase 7Aa / PHF8* / Q80TJ7* / Q9UPP1* / 4921501E09Rik* / PHD finger protein 8* / RIKEN cDNA 4921501E09 gene* / Histone lysine demethylase PHF8 *ENSDARG000000181119
kdm2ba / lysine (K)-specific demethylase 2BaENSDARG000000365937
btr30 / FBXL19 / zgc:158376 / Q6PCT2* / F-box and leucine rich repeat protein 19*ENSDARG000001033625


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR003347  JmjC domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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