ENSGALG00000039208


Gallus gallus

Features
Gene ID: ENSGALG00000039208
  
Biological name :PHF2
  
Synonyms : PHD finger protein 2 / PHF2
  
Possible biological names infered from orthology : Lysine-specific demethylase PHF2 / O75151 / Q9WTU0
  
Species: Gallus gallus
  
Chr. number: 12
Strand: -1
Band:
Gene start: 6301025
Gene end: 6381801
  
Corresponding Affymetrix probe sets: Gga.19619.1.S1_at (Chicken Array)   GgaAffx.3235.1.S1_s_at (Chicken Array)   GgaAffx.3235.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058487
NCBI entrez gene - 415981     See in Manteia.
RefSeq - XM_015293435
RefSeq - XM_015293436
RefSeq - XM_414324
swissprot - A0A1D5PZS1
Ensembl - ENSGALG00000039208
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 phf2ENSDARG00000018691Danio rerio
 PHF2ENSG00000197724Homo sapiens
 Phf2ENSMUSG00000038025Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KDM7A / lysine demethylase 7A / Q3UWM4* / Q6ZMT4* / Lysine-specific demethylase 7A *ENSGALG0000003510823
KDM2B / lysine demethylase 2B / Q6P1G2* / Q8NHM5* / Lysine-specific demethylase 2B *ENSGALG0000000422516


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR003347  JmjC domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006482 protein demethylation IEA
 biological_processGO:0033169 histone H3-K9 demethylation IEA
 biological_processGO:0061188 negative regulation of chromatin silencing at rDNA IEA
 cellular_componentGO:0000776 kinetochore IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0032454 histone demethylase activity (H3-K9 specific) IEA
 molecular_functionGO:0035064 methylated histone binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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