ENSDARG00000036754


Danio rerio

Features
Gene ID: ENSDARG00000036754
  
Biological name :hmgn3
  
Synonyms : high mobility group nucleosomal binding domain 3 / hmgn3
  
Possible biological names infered from orthology : High mobility group nucleosome-binding domain-containing protein 3 / Q15651 / Q9DCB1
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 31358088
Gene end: 31372807
  
Corresponding Affymetrix probe sets: Dr.8346.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000145853
Ensembl peptide - ENSDARP00000053366
Ensembl peptide - ENSDARP00000113097
NCBI entrez gene - 492345     See in Manteia.
RefSeq - NM_001243174
RefSeq - NM_001007311
RefSeq - NM_001243173
RefSeq - NM_001243176
RefSeq Peptide - NP_001230103
RefSeq Peptide - NP_001007312
RefSeq Peptide - NP_001230102
RefSeq Peptide - NP_001230105
swissprot - E9QH74
swissprot - Q5U381
ZFIN ID - ZDB-GENE-041114-180
Ensembl - ENSDARG00000036754
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HMGN3ENSGALG00000015880Gallus gallus
 HMGN3ENSG00000118418Homo sapiens
 Hmgn3ENSMUSG00000066456Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000079  High mobility group protein HMGN
 IPR031073  High mobility group protein HMGN3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0061178 regulation of insulin secretion involved in cellular response to glucose stimulus IEA
 cellular_componentGO:0000785 chromatin IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0031492 nucleosomal DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr