ENSG00000118418


Homo sapiens

Features
Gene ID: ENSG00000118418
  
Biological name :HMGN3
  
Synonyms : high mobility group nucleosomal binding domain 3 / HMGN3 / Q15651
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: q14.1
Gene start: 79201245
Gene end: 79234738
  
Corresponding Affymetrix probe sets: 209377_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000275036
Ensembl peptide - ENSP00000341267
Ensembl peptide - ENSP00000482613
NCBI entrez gene - 9324     See in Manteia.
OMIM - 604502
RefSeq - NM_001318886
RefSeq - NM_001318887
RefSeq - NM_001318888
RefSeq - NM_001201362
RefSeq - NM_001201363
RefSeq - NM_001318884
RefSeq - NM_001318885
RefSeq - NM_004242
RefSeq - NM_138730
RefSeq Peptide - NP_620058
RefSeq Peptide - NP_001188291
RefSeq Peptide - NP_001188292
RefSeq Peptide - NP_001305813
RefSeq Peptide - NP_001305814
RefSeq Peptide - NP_001305815
RefSeq Peptide - NP_001305816
RefSeq Peptide - NP_001305817
RefSeq Peptide - NP_004233
swissprot - A0A087WZE9
swissprot - Q15651
Ensembl - ENSG00000118418
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hmgn3ENSDARG00000036754Danio rerio
 HMGN3ENSGALG00000015880Gallus gallus
 Hmgn3ENSMUSG00000066456Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000079  High mobility group protein HMGN
 IPR031073  High mobility group protein HMGN3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IEA
 biological_processGO:0061178 regulation of insulin secretion involved in cellular response to glucose stimulus IEA
 cellular_componentGO:0000785 chromatin IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0031492 nucleosomal DNA binding IEA
 molecular_functionGO:0046966 thyroid hormone receptor binding NAS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr