ENSGALG00000015880


Gallus gallus

Features
Gene ID: ENSGALG00000015880
  
Biological name :HMGN3
  
Synonyms : High mobility group nucleosome-binding domain-containing protein 3 / HMGN3 / Q5ZIR5
  
Possible biological names infered from orthology : high mobility group nucleosomal binding domain 3 / Q15651 / Q9DCB1
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 79746415
Gene end: 79770440
  
Corresponding Affymetrix probe sets: Gga.8180.1.S1_at (Chicken Array)   Gga.8180.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000064716
Ensembl peptide - ENSGALP00000025549
NCBI entrez gene - 421853     See in Manteia.
RefSeq - XM_015284632
RefSeq - NM_001006412
RefSeq Peptide - NP_001006412
swissprot - Q5ZIR5
swissprot - A0A1L1S0Q9
Ensembl - ENSGALG00000015880
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hmgn3ENSDARG00000036754Danio rerio
 HMGN3ENSG00000118418Homo sapiens
 Hmgn3ENSMUSG00000066456Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000079  High mobility group protein HMGN
 IPR031073  High mobility group protein HMGN3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IEA
 biological_processGO:0061178 regulation of insulin secretion involved in cellular response to glucose stimulus IEA
 cellular_componentGO:0000785 chromatin IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0031492 nucleosomal DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr