ENSDARG00000038153


Danio rerio

Features
Gene ID: ENSDARG00000038153
  
Biological name :lgals2b
  
Synonyms : lectin, galactoside-binding, soluble, 2b / lgals2b
  
Possible biological names infered from orthology : galectin 1 / LGALS1 / P09382 / P16045
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 603278
Gene end: 609887
  
Corresponding Affymetrix probe sets: Dr.15088.1.A1_at (Zebrafish Array)   NM_200514_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000124603
Ensembl peptide - ENSDARP00000124875
Ensembl peptide - ENSDARP00000125939
Ensembl peptide - ENSDARP00000151176
Ensembl peptide - ENSDARP00000124248
Ensembl peptide - ENSDARP00000124716
NCBI entrez gene - 393486     See in Manteia.
RefSeq - XM_005172064
RefSeq - NM_200514
RefSeq Peptide - NP_956808
swissprot - F8W2I6
swissprot - F8W2U6
swissprot - I3ISQ0
ZFIN ID - ZDB-GENE-040426-1590
Ensembl - ENSDARG00000038153
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CG-16ENSGALG00000042020Gallus gallus
 LGALS1ENSGALG00000012420Gallus gallus
 LGALS1ENSG00000100097Homo sapiens
 Lgals1ENSMUSG00000068220Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lgals2a / lectin, galactoside-binding, soluble, 2a / LGALS1* / P16045* / P09382* / galectin 1*ENSDARG0000005494247
lgals1l1 / lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1 / LGALS1* / P16045* / P09382* / galectin 1*ENSDARG0000008871142


Protein motifs (from Interpro)
Interpro ID Name
 IPR001079  Galectin, carbohydrate recognition domain
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001944 vasculature development IMP
 biological_processGO:0002040 sprouting angiogenesis IGI
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Post-translational protein phosphorylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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