ENSDARG00000038308


Danio rerio

Features
Gene ID: ENSDARG00000038308
  
Biological name :ykt6
  
Synonyms : ykt6 / YKT6 v-SNARE homolog (S. cerevisiae)
  
Possible biological names infered from orthology : O15498 / Q9CQW1 / YKT6 v-SNARE homolog
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 2841205
Gene end: 2850936
  
Corresponding Affymetrix probe sets: Dr.24252.1.S1_at (Zebrafish Array)   NM_201092_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000121331
Ensembl peptide - ENSDARP00000157654
Ensembl peptide - ENSDARP00000055868
NCBI entrez gene - 394067     See in Manteia.
RefSeq - NM_201092
RefSeq Peptide - NP_957386
swissprot - F1Q581
swissprot - F1RAJ8
ZFIN ID - ZDB-GENE-040426-733
Ensembl - ENSDARG00000038308
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000029898Gallus gallus
 YKT6ENSG00000106636Homo sapiens
 Ykt6ENSMUSG00000002741Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001388  Synaptobrevin
 IPR010908  Longin domain
 IPR011012  Longin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
COPI-mediated anterograde transport
Intra-Golgi traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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