ENSGALG00000029898


Gallus gallus

Features
Gene ID: ENSGALG00000029898
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : O15498 / Q9CQW1 / YKT6 / YKT6 v-SNARE homolog / YKT6 v-SNARE homolog (S. cerevisiae)
  
Species: Gallus gallus
  
Chr. number: 22
Strand: -1
Band:
Gene start: 4699235
Gene end: 4702138
  
Corresponding Affymetrix probe sets: GgaAffx.8342.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052120
NCBI entrez gene - 107054993     See in Manteia.
RefSeq - XM_015297508
swissprot - A0A1D5PH43
Ensembl - ENSGALG00000029898
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ykt6ENSDARG00000038308Danio rerio
 YKT6ENSG00000106636Homo sapiens
 Ykt6ENSMUSG00000002741Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001388  Synaptobrevin
 IPR010908  Longin domain
 IPR011012  Longin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
COPI-mediated anterograde transport
Intra-Golgi traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000004172 BET1L / Bet1 golgi vesicular membrane trafficking protein like / O35153* / Q9NYM9* / Gm45785* / BET1-like protein *  / complex
 ENSGALG00000001055 NSF / P46459* / P46460* / Vesicle-fusing ATPase * / N-ethylmaleimide sensitive factor, vesicle fusing ATPase*  / reaction / complex






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr