ENSG00000106636


Homo sapiens

Features
Gene ID: ENSG00000106636
  
Biological name :YKT6
  
Synonyms : O15498 / YKT6 / YKT6 v-SNARE homolog
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: p13
Gene start: 44200968
Gene end: 44214294
  
Corresponding Affymetrix probe sets: 217784_at (Human Genome U133 Plus 2.0 Array)   217785_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000420805
Ensembl peptide - ENSP00000223369
Ensembl peptide - ENSP00000412414
NCBI entrez gene - 10652     See in Manteia.
OMIM - 606209
RefSeq - XM_017011682
RefSeq - NM_006555
RefSeq - XM_005249582
RefSeq Peptide - NP_006546
swissprot - O15498
swissprot - H7C3K7
swissprot - A4D2J0
Ensembl - ENSG00000106636
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ykt6ENSDARG00000038308Danio rerio
 ENSGALG00000029898Gallus gallus
 Ykt6ENSMUSG00000002741Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001388  Synaptobrevin
 IPR010908  Longin domain
 IPR011012  Longin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IDA
 biological_processGO:0006903 vesicle targeting IDA
 biological_processGO:0006904 vesicle docking involved in exocytosis IDA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IDA
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005768 endosome IDA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005887 integral component of plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030133 transport vesicle TAS
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0031201 SNARE complex TAS
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane TAS
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0097440 apical dendrite IEA
 cellular_componentGO:0097441 basal dendrite IEA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0019706 protein-cysteine S-palmitoyltransferase activity IDA
 molecular_functionGO:0045296 cadherin binding IDA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
COPI-mediated anterograde transport
Intra-Golgi traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000173905 GOLIM4 / O00461 / golgi integral membrane protein 4  / reaction
 ENSG00000257923 CUX1 / P39880 / Q13948 / cut like homeobox 1  / reaction
 ENSG00000066455 GOLGA5 / Q8TBA6 / golgin A5  / reaction
 ENSG00000108587 GOSR1 / O95249 / golgi SNAP receptor complex member 1  / reaction / complex
 ENSG00000177951 BET1L / Q9NYM9 / Bet1 golgi vesicular membrane trafficking protein like  / complex
 ENSG00000162236 STX5 / Q13190 / syntaxin 5  / complex
 ENSG00000108433 GOSR2 / O14653 / golgi SNAP receptor complex member 2  / complex
 ENSG00000105829 BET1 / O15155 / Bet1 golgi vesicular membrane trafficking protein  / complex
 ENSG00000105402 NAPA / P54920 / NSF attachment protein alpha  / complex / reaction
 ENSG00000073969 NSF / P46459 / N-ethylmaleimide sensitive factor, vesicle fusing ATPase  / reaction / complex






 

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