ENSMUSG00000002741


Mus musculus

Features
Gene ID: ENSMUSG00000002741
  
Biological name :Ykt6
  
Synonyms : Q9CQW1 / Ykt6 / YKT6 v-SNARE homolog (S. cerevisiae)
  
Possible biological names infered from orthology : O15498 / YKT6 v-SNARE homolog
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: A1
Gene start: 5955693
Gene end: 5967780
  
Corresponding Affymetrix probe sets: 10374106 (MoGene1.0st)   1448464_at (Mouse Genome 430 2.0 Array)   1460191_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000002818
NCBI entrez gene - 56418     See in Manteia.
MGI - MGI:1927550
RefSeq - NM_019661
RefSeq Peptide - NP_062635
swissprot - Q9CQW1
Ensembl - ENSMUSG00000002741
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ykt6ENSDARG00000038308Danio rerio
 ENSGALG00000029898Gallus gallus
 YKT6ENSG00000106636Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001388  Synaptobrevin
 IPR010908  Longin domain
 IPR011012  Longin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006887 exocytosis IBA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IEA
 biological_processGO:0006903 vesicle targeting ISS
 biological_processGO:0006904 vesicle docking involved in exocytosis ISS
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus ISO
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0031201 SNARE complex IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0097440 apical dendrite IEA
 cellular_componentGO:0097441 basal dendrite IEA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0019706 protein-cysteine S-palmitoyltransferase activity ISS
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
COPI-mediated anterograde transport
Intra-Golgi traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000020946 Gosr2 / O35166 / golgi SNAP receptor complex member 2 / O14653* / AC005670.2*  / complex
 ENSMUSG00000025484 Bet1l / O35153 / BET1-like protein / Q9NYM9* / Bet1 golgi vesicular membrane trafficking protein like*  / complex
 ENSMUSG00000010110 Stx5a / Q8K1E0 / Syntaxin-5 / STX5* / Q13190*  / complex
 ENSMUSG00000034187 Nsf / P46460 / Vesicle-fusing ATPase / P46459* / N-ethylmaleimide sensitive factor, vesicle fusing ATPase*  / reaction / complex
 ENSMUSG00000032757 Bet1 / O35623 / BET1 homolog / O15155* / Bet1 golgi vesicular membrane trafficking protein*  / complex
 ENSMUSG00000010392 Gosr1 / O88630 / golgi SNAP receptor complex member 1 / O95249*  / complex / reaction
 ENSMUSG00000006024 Napa / Q9DB05 / Alpha-soluble NSF attachment protein / P54920* / NSF attachment protein alpha*  / reaction / complex
 ENSMUSG00000021192 Golga5 / Q9QYE6 / golgi autoantigen, golgin subfamily a, 5 / Q8TBA6* / golgin A5*  / reaction
 ENSMUSG00000034109 Golim4 / Q8BXA1 / golgi integral membrane protein 4 / O00461*  / reaction






 

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