ENSDARG00000038882
Danio rerio | |
Features
| Gene ID: | ENSDARG00000038882 | | | | | Biological name : | smc4 | | | | | Synonyms : | smc4 / structural maintenance of chromosomes 4 | | | | | Possible biological names infered from orthology : | Mus musculus structural maintenance of chromosomes 4 (Smc4), transcript variant 2, mRNA. / Q8CG47 / Q9NTJ3 | | | | | Species: | Danio rerio | | | | | Chr. number: | 15 | | Strand: | 1 | | Band: | | | Gene start: | 1534644 | | Gene end: | 1573129 | | | | | Corresponding Affymetrix probe sets: | Dr.1653.1.S1_at (Zebrafish Array) NM_173253_at (Zebrafish Genome Array with custom cdf files) | | | | | Cross references: | Ensembl peptide - ENSDARP00000108838
NCBI entrez gene - 192332
See in Manteia.
RefSeq - NM_173253
RefSeq Peptide - NP_775360
swissprot - E7FGC2
ZFIN ID - ZDB-GENE-020419-21
Ensembl - ENSDARG00000038882
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See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed
Ortholog prediction (from Ensembl)
Paralog prediction (from Ensembl)
No match
Protein motifs (from Interpro)
| IPR003395 | RecF/RecN/SMC, N-terminal | | IPR010935 | SMCs flexible hinge | | IPR024704 | Structural maintenance of chromosomes protein | | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Gene Ontology (GO)
Pathways (from Reactome)
Phenotype (from MGI, Zfin or HPO)
| ZFA:0000008 | brain | brain necrotic , abnormal |
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| | ZFA:0000012 | central nervous system | central nervous system necrotic , abnormal |
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| | ZFA:0000054 | pericardium | pericardium edematous , abnormal |
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| | ZFA:0000107 | eye | eye decreased size , abnormal |
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| | ZFA:0000112 | gut | gut hypoplastic , abnormal |
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| | ZFA:0000114 | heart | heart quality , abnormal |
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| | ZFA:0000123 | liver | liver hypoplastic , abnormal |
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| | ZFA:0001114 | head | head decreased size , abnormal |
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Interacting proteins (from Reactome)
No match
0 s.
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