ENSG00000113810


Homo sapiens

Features
Gene ID: ENSG00000113810
  
Biological name :SMC4
  
Synonyms : Q9NTJ3 / SMC4 / structural maintenance of chromosomes 4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: q25.33
Gene start: 160399274
Gene end: 160434962
  
Corresponding Affymetrix probe sets: 201663_s_at (Human Genome U133 Plus 2.0 Array)   201664_at (Human Genome U133 Plus 2.0 Array)   215623_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000417964
Ensembl peptide - ENSP00000420817
Ensembl peptide - ENSP00000420734
Ensembl peptide - ENSP00000420644
Ensembl peptide - ENSP00000420121
Ensembl peptide - ENSP00000419360
Ensembl peptide - ENSP00000419247
Ensembl peptide - ENSP00000418820
Ensembl peptide - ENSP00000418434
Ensembl peptide - ENSP00000417999
Ensembl peptide - ENSP00000341382
Ensembl peptide - ENSP00000349961
Ensembl peptide - ENSP00000417612
NCBI entrez gene - 10051     See in Manteia.
OMIM - 605575
RefSeq - XM_017005491
RefSeq - NM_001002800
RefSeq - NM_001288753
RefSeq - NM_005496
RefSeq - XM_006713459
RefSeq - XM_011512311
RefSeq - XM_011512312
RefSeq Peptide - NP_005487
RefSeq Peptide - NP_001002800
RefSeq Peptide - NP_001275682
swissprot - E9PD53
swissprot - C9JVD8
swissprot - C9JR83
swissprot - C9JJ64
swissprot - C9J9E4
swissprot - C9J578
swissprot - C9JWF0
swissprot - C9IYK2
swissprot - F8WCB7
swissprot - Q9NTJ3
Ensembl - ENSG00000113810
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 smc4ENSDARG00000038882Danio rerio
 SMC4ENSGALG00000009553Gallus gallus
 Smc4ENSMUSG00000034349Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003395  RecF/RecN/SMC, N-terminal
 IPR010935  SMCs flexible hinge
 IPR024704  Structural maintenance of chromosomes protein
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR036277  SMCs flexible hinge superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000070 mitotic sister chromatid segregation TAS
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007076 mitotic chromosome condensation IDA
 biological_processGO:0010032 meiotic chromosome condensation IEA
 biological_processGO:0030261 chromosome condensation IEA
 biological_processGO:0045132 meiotic chromosome segregation IEA
 biological_processGO:0051276 chromosome organization IEA
 biological_processGO:0051301 cell division IEA
 biological_processGO:0051383 kinetochore organization IEA
 cellular_componentGO:0000796 condensin complex TAS
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016607 nuclear speck IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding TAS
 molecular_functionGO:0046982 protein heterodimerization activity IPI


Pathways (from Reactome)
Pathway description
Condensation of Prophase Chromosomes
Condensation of Prometaphase Chromosomes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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