ENSDARG00000039185


Danio rerio

Features
Gene ID: ENSDARG00000039185
  
Biological name :nfyba
  
Synonyms : nfyba / nuclear transcription factor Y, beta a
  
Possible biological names infered from orthology : NFYB / nuclear transcription factor Y subunit beta / P25208 / P63139
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 9177997
Gene end: 9183602
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000138536
Ensembl peptide - ENSDARP00000057253
Ensembl peptide - ENSDARP00000128248
NCBI entrez gene - 550227     See in Manteia.
RefSeq - NM_001017565
RefSeq - XM_005168523
RefSeq Peptide - NP_001017565
swissprot - Q561X4
swissprot - X1WDE9
swissprot - A0A0R4IR22
ZFIN ID - ZDB-GENE-050417-13
Ensembl - ENSDARG00000039185
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NFYBENSGALG00000041193Gallus gallus
 NFYBENSG00000120837Homo sapiens
 NfybENSMUSG00000020248Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nfybb / nuclear transcription factor Y, beta b / NFYB* / P25208* / P63139* / nuclear transcription factor Y subunit beta*ENSDARG0000004561182
pole3 / polymerase (DNA directed), epsilon 3 (p17 subunit) / Q9NRF9* / DNA polymerase epsilon 3, accessory subunit*ENSDARG0000000855119


Protein motifs (from Interpro)
Interpro ID Name
 IPR003956  Transcription factor, NFYB/HAP3, conserved site
 IPR003958  Transcription factor CBF/NF-Y/archaeal histone domain
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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