ENSDARG00000039240


Danio rerio

Features
Gene ID: ENSDARG00000039240
  
Biological name :cacng5b
  
Synonyms : cacng5a / cacng5b / calcium channel, voltage-dependent, gamma subunit 5b
  
Possible biological names infered from orthology : CACNG5 / calcium voltage-gated channel auxiliary subunit gamma 5 / Q8VHW4 / Q9UF02 / Voltage-dependent calcium channel gamma-5 subunit
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 56366395
Gene end: 56394018
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000128562
Ensembl peptide - ENSDARP00000126045
NCBI entrez gene - 100331116     See in Manteia.
swissprot - X1WEB1
swissprot - E7EXE2
ZFIN ID - ZDB-GENE-120104-4
ZFIN ID - ZDB-GENE-120104-3
Ensembl - ENSDARG00000039240
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CACNG5ENSGALG00000003911Gallus gallus
 CACNG5ENSG00000075429Homo sapiens
 Cacng5ENSMUSG00000040373Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cacng5a / calcium channel, voltage-dependent, gamma subunit 5a / CACNG5* / Q9UF02* / calcium voltage-gated channel auxiliary subunit gamma 5*ENSDARG0000000332689
cacng7a / calcium channel, voltage-dependent, gamma subunit 7a / CACNG7* / P62955* / P62956* / Voltage-dependent calcium channel gamma-7 subunit * / calcium voltage-gated channel auxiliary ...ENSDARG0000006300666
cacng7b / calcium channel, voltage-dependent, gamma subunit 7b / CACNG7* / P62955* / P62956* / Voltage-dependent calcium channel gamma-7 subunit * / calcium voltage-gated channel auxiliary ...ENSDARG0000007062464
cacng2a / calcium channel, voltage-dependent, gamma subunit 2a / CACNG2* / O88602* / Q9Y698* / Voltage-dependent calcium channel gamma-2 subunit * / calcium voltage-gated channel auxiliary ...ENSDARG0000003256530
cacng8b / calcium channel, voltage-dependent, gamma subunit 8b / CACNG8* / Q8WXS5* / voltage-dependent calcium channel gamma-8 subunit * / calcium voltage-gated channel auxiliary subunit gamma 8*ENSDARG0000007062630
cacng3b / calcium channel, voltage-dependent, gamma subunit 3b / CACNG3* / O60359* / Q9JJV5* / Voltage-dependent calcium channel gamma-3 subunit * / calcium voltage-gated channel auxiliary ...ENSDARG0000007640129
cacng3a / calcium channel, voltage-dependent, gamma subunit 3a / CACNG3* / O60359* / Q9JJV5* / Voltage-dependent calcium channel gamma-3 subunit * / calcium voltage-gated channel auxiliary ...ENSDARG0000005846029
cacng8a / calcium channel, voltage-dependent, gamma subunit 8a / CACNG8* / Q8WXS5* / voltage-dependent calcium channel gamma-8 subunit * / calcium voltage-gated channel auxiliary subunit gamma 8*ENSDARG0000002045029
cacng4b / calcium channel, voltage-dependent, gamma subunit 4b / CACNG4* / Q9UBN1* / calcium voltage-gated channel auxiliary subunit gamma 4*ENSDARG0000007466928
cacng4a / calcium channel, voltage-dependent, gamma subunit 4a / CACNG4* / Q9UBN1* / calcium voltage-gated channel auxiliary subunit gamma 4*ENSDARG0000011554028


Protein motifs (from Interpro)
Interpro ID Name
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR008368  Voltage-dependent calcium channel, gamma subunit
 IPR008369  Voltage-dependent calcium channel, gamma-5 subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0019226 transmission of nerve impulse IBA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0070588 calcium ion transmembrane transport IBA
 biological_processGO:2000311 regulation of AMPA receptor activity IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032281 AMPA glutamate receptor complex IBA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005245 voltage-gated calcium channel activity IBA
 molecular_functionGO:0005262 calcium channel activity IEA
 molecular_functionGO:0016247 channel regulator activity IBA


Pathways (from Reactome)
Pathway description
Phase 0 - rapid depolarisation
Phase 2 - plateau phase


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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