ENSDARG00000115540


Danio rerio

Features
Gene ID: ENSDARG00000115540
  
Biological name :cacng4a
  
Synonyms : cacng4a / calcium channel, voltage-dependent, gamma subunit 4a
  
Possible biological names infered from orthology : CACNG4 / calcium voltage-gated channel auxiliary subunit gamma 4 / Q9JJV4 / Q9UBN1 / Voltage-dependent calcium channel gamma-4 subunit
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 21513363
Gene end: 21521755
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000152488
NCBI entrez gene - 797554     See in Manteia.
swissprot - E7F9E7
ZFIN ID - ZDB-GENE-120215-100
Ensembl - ENSDARG00000115540
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CACNG4ENSGALG00000026091Gallus gallus
 CACNG4ENSG00000075461Homo sapiens
 Cacng4ENSMUSG00000020723Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cacng4b / calcium channel, voltage-dependent, gamma subunit 4b / CACNG4* / Q9UBN1* / calcium voltage-gated channel auxiliary subunit gamma 4*ENSDARG0000007466963
cacng8a / calcium channel, voltage-dependent, gamma subunit 8a / CACNG8* / Q8WXS5* / voltage-dependent calcium channel gamma-8 subunit * / calcium voltage-gated channel auxiliary subunit gamma 8*ENSDARG0000002045053
cacng8b / calcium channel, voltage-dependent, gamma subunit 8b / CACNG8* / Q8WXS5* / voltage-dependent calcium channel gamma-8 subunit * / calcium voltage-gated channel auxiliary subunit gamma 8*ENSDARG0000007062652
cacng2a / calcium channel, voltage-dependent, gamma subunit 2a / CACNG2* / O88602* / Q9Y698* / Voltage-dependent calcium channel gamma-2 subunit * / calcium voltage-gated channel auxiliary ...ENSDARG0000003256551
cacng3b / calcium channel, voltage-dependent, gamma subunit 3b / CACNG3* / O60359* / Q9JJV5* / Voltage-dependent calcium channel gamma-3 subunit * / calcium voltage-gated channel auxiliary ...ENSDARG0000007640147
cacng3a / calcium channel, voltage-dependent, gamma subunit 3a / CACNG3* / O60359* / Q9JJV5* / Voltage-dependent calcium channel gamma-3 subunit * / calcium voltage-gated channel auxiliary ...ENSDARG0000005846043
cacng7a / calcium channel, voltage-dependent, gamma subunit 7a / CACNG7* / P62955* / P62956* / Voltage-dependent calcium channel gamma-7 subunit * / calcium voltage-gated channel auxiliary ...ENSDARG0000006300625
cacng7b / calcium channel, voltage-dependent, gamma subunit 7b / CACNG7* / P62955* / P62956* / Voltage-dependent calcium channel gamma-7 subunit * / calcium voltage-gated channel auxiliary ...ENSDARG0000007062424
cacng5a / calcium channel, voltage-dependent, gamma subunit 5a / CACNG5* / Q9UF02* / calcium voltage-gated channel auxiliary subunit gamma 5*ENSDARG0000000332623
cacng5a / cacng5b / calcium channel, voltage-dependent, gamma subunit 5b / CACNG5* / Q9UF02* / Q8VHW4* / Voltage-dependent calcium channel gamma-5 subunit * / calcium voltage-gated channel ...ENSDARG0000003924023


Protein motifs (from Interpro)
Interpro ID Name
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR005423  Voltage-dependent calcium channel, gamma-4 subunit
 IPR008368  Voltage-dependent calcium channel, gamma subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0019226 transmission of nerve impulse IBA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0070588 calcium ion transmembrane transport IBA
 biological_processGO:2000311 regulation of AMPA receptor activity IBA
 cellular_componentGO:0005891 voltage-gated calcium channel complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032281 AMPA glutamate receptor complex IBA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005245 voltage-gated calcium channel activity IBA
 molecular_functionGO:0005262 calcium channel activity IEA
 molecular_functionGO:0016247 channel regulator activity IBA


Pathways (from Reactome)
Pathway description
Presynaptic depolarization and calcium channel opening
Phase 0 - rapid depolarisation
Phase 2 - plateau phase


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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