ENSDARG00000020450


Danio rerio

Features
Gene ID: ENSDARG00000020450
  
Biological name :cacng8a
  
Synonyms : cacng8a / calcium channel, voltage-dependent, gamma subunit 8a
  
Possible biological names infered from orthology : CACNG8 / calcium voltage-gated channel auxiliary subunit gamma 8 / Q8WXS5 / voltage-dependent calcium channel gamma-8 subunit
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 9813287
Gene end: 9829965
  
Corresponding Affymetrix probe sets: Dr.14582.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000118548
Ensembl peptide - ENSDARP00000114738
NCBI entrez gene - 550428     See in Manteia.
RefSeq - NM_001326483
RefSeq - XM_009294042
RefSeq - XM_005159434
RefSeq Peptide - NP_001313412
swissprot - Q1L8R5
swissprot - Q1L8R6
ZFIN ID - ZDB-GENE-050417-239
Ensembl - ENSDARG00000020450
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CACNG8ENSG00000142408Homo sapiens
 Cacng8ENSMUSG00000053395Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cacng8b / calcium channel, voltage-dependent, gamma subunit 8b / CACNG8* / Q8WXS5* / voltage-dependent calcium channel gamma-8 subunit * / calcium voltage-gated channel auxiliary subunit gamma 8*ENSDARG0000007062672
cacng4b / calcium channel, voltage-dependent, gamma subunit 4b / CACNG4* / Q9UBN1* / calcium voltage-gated channel auxiliary subunit gamma 4*ENSDARG0000007466945
cacng2a / calcium channel, voltage-dependent, gamma subunit 2a / CACNG2* / O88602* / Q9Y698* / Voltage-dependent calcium channel gamma-2 subunit * / calcium voltage-gated channel auxiliary ...ENSDARG0000003256544
cacng3b / calcium channel, voltage-dependent, gamma subunit 3b / CACNG3* / O60359* / Q9JJV5* / Voltage-dependent calcium channel gamma-3 subunit * / calcium voltage-gated channel auxiliary ...ENSDARG0000007640141
cacng4a / calcium channel, voltage-dependent, gamma subunit 4a / CACNG4* / Q9UBN1* / calcium voltage-gated channel auxiliary subunit gamma 4*ENSDARG0000011554040
cacng3a / calcium channel, voltage-dependent, gamma subunit 3a / CACNG3* / O60359* / Q9JJV5* / Voltage-dependent calcium channel gamma-3 subunit * / calcium voltage-gated channel auxiliary ...ENSDARG0000005846035
cacng5a / calcium channel, voltage-dependent, gamma subunit 5a / CACNG5* / Q9UF02* / calcium voltage-gated channel auxiliary subunit gamma 5*ENSDARG0000000332618
cacng7b / calcium channel, voltage-dependent, gamma subunit 7b / CACNG7* / P62955* / P62956* / Voltage-dependent calcium channel gamma-7 subunit * / calcium voltage-gated channel auxiliary ...ENSDARG0000007062418
cacng5a / cacng5b / calcium channel, voltage-dependent, gamma subunit 5b / CACNG5* / Q9UF02* / Q8VHW4* / Voltage-dependent calcium channel gamma-5 subunit * / calcium voltage-gated channel ...ENSDARG0000003924018
cacng7a / calcium channel, voltage-dependent, gamma subunit 7a / CACNG7* / P62955* / P62956* / Voltage-dependent calcium channel gamma-7 subunit * / calcium voltage-gated channel auxiliary ...ENSDARG0000006300618


Protein motifs (from Interpro)
Interpro ID Name
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR008368  Voltage-dependent calcium channel, gamma subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0019226 transmission of nerve impulse IBA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0070588 calcium ion transmembrane transport IBA
 biological_processGO:2000311 regulation of AMPA receptor activity IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032281 AMPA glutamate receptor complex IBA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005245 voltage-gated calcium channel activity IBA
 molecular_functionGO:0005262 calcium channel activity IEA
 molecular_functionGO:0016247 channel regulator activity IBA


Pathways (from Reactome)
Pathway description
Phase 0 - rapid depolarisation
Phase 2 - plateau phase


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000060532 adam22 / ADAM metallopeptidase domain 22 / Q9P0K1* / Q9R1V6* / Disintegrin and metalloproteinase domain-containing protein 22 *  / complex






 

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