ENSDARG00000039512


Danio rerio

Features
Gene ID: ENSDARG00000039512
  
Biological name :ap1m3
  
Synonyms : adaptor-related protein complex 1, mu 3 subunit / ap1m3
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 34038963
Gene end: 34073164
  
Corresponding Affymetrix probe sets: Dr.21190.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000057731
Ensembl peptide - ENSDARP00000146461
NCBI entrez gene - 445244     See in Manteia.
RefSeq - NM_001114441
RefSeq - XM_021476834
RefSeq Peptide - NP_001107913
swissprot - Q6DEK5
swissprot - F1Q997
ZFIN ID - ZDB-GENE-040801-159
Ensembl - ENSDARG00000039512
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ap1m2 / adaptor-related protein complex 1, mu 2 subunit / Q9Y6Q5*ENSDARG0000009645480
ap1m1 / adaptor-related protein complex 1, mu 1 subunit / Q9BXS5*ENSDARG0000009624979
Q6NWK2 / ap2m1a / ap2m1b / adaptor-related protein complex 2, mu 1 subunit, b / AP2M1* / Q96CW1* / P84091* / AP-2 complex subunit mu * / adaptor related protein complex 2 mu 1 subunit*ENSDARG0000000279041
ap2m1b / adaptor-related protein complex 2, mu 1 subunit, b / AP2M1* / Q96CW1* / P84091* / AP-2 complex subunit mu * / adaptor related protein complex 2 mu 1 subunit*ENSDARG0000003389941
LO018011.1 / AP1M2* / Q9Y6Q5* / adaptor related protein complex 1 mu 2 subunit*ENSDARG0000011393235
ap4m1 / adaptor-related protein complex 4, mu 1 subunit / O00189* / Q9JKC7* / AP-4 complex subunit mu-1 *ENSDARG0000005687132
ap3m1 / adaptor-related protein complex 3, mu 1 subunit / Q9JKC8* / Q9Y2T2* / AP-3 complex subunit mu-1 *ENSDARG0000002992828
ap3m2 / adaptor-related protein complex 3, mu 2 subunit / P53677* / Q8R2R9* / AP-3 complex subunit mu-2 *ENSDARG0000001612827


Protein motifs (from Interpro)
Interpro ID Name
 IPR001392  Clathrin adaptor, mu subunit
 IPR011012  Longin-like domain superfamily
 IPR018240  Clathrin adaptor, mu subunit, conserved site
 IPR022775  AP complex, mu/sigma subunit
 IPR028565  Mu homology domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0007420 brain development IMP
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030131 clathrin adaptor complex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain morphology , abnormal
Show

 ZFA:0000012 central nervous system central nervous system disorganized , abnormal
Show

 ZFA:0000029 hindbrain hindbrain morphology , abnormal
Show

 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary morphology , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000100 cerebellum cerebellum morphology , abnormal
Show

 ZFA:0000128 midbrain midbrain morphology , abnormal
Show

 ZFA:0001259 forebrain ventricle forebrain ventricle morphology , abnormal
Show

 ZFA:0001462 somite border somite border malformed , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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