ENSDARG00000096454


Danio rerio

Features
Gene ID: ENSDARG00000096454
  
Biological name :ap1m2
  
Synonyms : adaptor-related protein complex 1, mu 2 subunit / ap1m2
  
Possible biological names infered from orthology : Q9Y6Q5
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 112579
Gene end: 119859
  
Corresponding Affymetrix probe sets: Dr.20705.1.A1_at (Zebrafish Array)   NM_205714_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000037980
NCBI entrez gene - 403021     See in Manteia.
RefSeq - NM_205714
RefSeq Peptide - NP_991277
swissprot - F1R3L9
ZFIN ID - ZDB-GENE-041114-20
Ensembl - ENSDARG00000096454
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AP1M2ENSG00000129354Homo sapiens
 Ap1m2ENSMUSG00000003309Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ap1m3 / adaptor-related protein complex 1, mu 3 subunitENSDARG0000003951279
ap1m1 / adaptor-related protein complex 1, mu 1 subunit / Q9BXS5*ENSDARG0000009624977
LO018011.1 / AP1M2* / Q9Y6Q5* / adaptor related protein complex 1 mu 2 subunit*ENSDARG0000011393246
Q6NWK2 / ap2m1a / ap2m1b / adaptor-related protein complex 2, mu 1 subunit, b / AP2M1* / Q96CW1* / P84091* / AP-2 complex subunit mu * / adaptor related protein complex 2 mu 1 subunit*ENSDARG0000000279039
ap2m1b / adaptor-related protein complex 2, mu 1 subunit, b / AP2M1* / Q96CW1* / P84091* / AP-2 complex subunit mu * / adaptor related protein complex 2 mu 1 subunit*ENSDARG0000003389939
ap4m1 / adaptor-related protein complex 4, mu 1 subunit / O00189* / Q9JKC7* / AP-4 complex subunit mu-1 *ENSDARG0000005687131
ap3m1 / adaptor-related protein complex 3, mu 1 subunit / Q9JKC8* / Q9Y2T2* / AP-3 complex subunit mu-1 *ENSDARG0000002992829
ap3m2 / adaptor-related protein complex 3, mu 2 subunit / P53677* / Q8R2R9* / AP-3 complex subunit mu-2 *ENSDARG0000001612828


Protein motifs (from Interpro)
Interpro ID Name
 IPR001392  Clathrin adaptor, mu subunit
 IPR011012  Longin-like domain superfamily
 IPR018240  Clathrin adaptor, mu subunit, conserved site
 IPR022775  AP complex, mu/sigma subunit
 IPR028565  Mu homology domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001822 kidney development IMP
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006892 post-Golgi vesicle-mediated transport IDA
 biological_processGO:0007420 brain development IGI
 biological_processGO:0009887 animal organ morphogenesis IMP
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0048565 digestive tract development IGI
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030131 clathrin adaptor complex IEA


Pathways (from Reactome)
Pathway description
MHC class II antigen presentation
Lysosome Vesicle Biogenesis
Golgi Associated Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000112 gut gut deformed , abnormal
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 ZFA:0001117 post-vent region post-vent region kinked , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000009087 cd74a / CD74 molecule, major histocompatibility complex, class II invariant chain a / CD74* / P04233* / P04441* / CD74 molecule* / CD74 antigen (invariant polypeptide of major histocompatib...  / complex
 ENSDARG00000056803 ap1s1 / adaptor-related protein complex 1, sigma 1 subunit / P61966* / P61967* / AP-1 complex subunit sigma-1A *  / complex
 ENSDARG00000110439 ap1s3a / adaptor-related protein complex 1, sigma 3 subunit, a / AP1S3* / Q96PC3* / adaptor related protein complex 1 sigma 3 subunit*  / complex
 ENSDARG00000020621 ap1b1 / adaptor-related protein complex 1, beta 1 subunit / O35643* / Q10567* / Mus musculus adaptor protein complex AP-1, beta 1 subunit (Ap1b1), transcript variant 4, mRNA.*  / complex
 ENSDARG00000027966 ap1s3b / adaptor-related protein complex 1, sigma 3 subunit, b / AP1S3* / Q96PC3* / Q7TN05* / AP-1 complex subunit sigma-3 * / adaptor related protein complex 1 sigma 3 subunit*  / complex
 ENSDARG00000045618 clta / clathrin, light chain A / P09496*  / complex
 ENSDARG00000053122 clvs2 / Q5SPP0 / clavesin 2 / CLVS1* / Q8IUQ0* / clavesin 1*  / complex
 ENSDARG00000090716 cltcb / clathrin, heavy chain b (Hc) / CLTC* / Q00610* / clathrin heavy chain*  / complex






 

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