ENSDARG00000040352


Danio rerio

Features
Gene ID: ENSDARG00000040352
  
Biological name :crot
  
Synonyms : carnitine O-octanoyltransferase / crot
  
Possible biological names infered from orthology : Peroxisomal carnitine O-octanoyltransferase / Q9DC50 / Q9UKG9
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 28601974
Gene end: 28627568
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000007394
Ensembl peptide - ENSDARP00000150510
NCBI entrez gene - 553204     See in Manteia.
RefSeq - NM_001018151
RefSeq Peptide - NP_001018161
swissprot - F1QAI1
ZFIN ID - ZDB-GENE-050522-35
Ensembl - ENSDARG00000040352
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CROTENSGALG00000008813Gallus gallus
 CROTENSG00000005469Homo sapiens
 CrotENSMUSG00000003623Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:154046 / CRAT* / P43155* / P47934* / carnitine acetyltransferase* / carnitine O-acetyltransferase*ENSDARG0000001654531
crata / carnitine O-acetyltransferase a / CRAT* / P47934* / P43155* / carnitine acetyltransferase* / carnitine O-acetyltransferase*ENSDARG0000004024830
cpt1cb / carnitine palmitoyltransferase 1CbENSDARG0000003794330
cpt1ab / carnitine palmitoyltransferase 1Ab (liver) / CPT1A* / P97742* / P50416* / carnitine palmitoyltransferase 1A* / Carnitine O-palmitoyltransferase 1, liver isoform *ENSDARG0000006205430
cpt1b / carnitine palmitoyltransferase 1B (muscle) / CPT1C* / Q92523* / Q8BGD5* / Q8TCG5* / Q924X2* / carnitine palmitoyltransferase 1C* / carnitine palmitoyltransferase 1B* / Carnitine O-p...ENSDARG0000005828529
chata / B2ZGJ1 / choline O-acetyltransferase a / CHAT* / P28329* / choline O-acetyltransferase*ENSDARG0000001585429
cpt1aa / carnitine palmitoyltransferase 1Aa (liver) / CPT1A* / P97742* / P50416* / carnitine palmitoyltransferase 1A* / Carnitine O-palmitoyltransferase 1, liver isoform *ENSDARG0000005977029
CABZ01055347.1ENSDARG0000006166028
cratb / carnitine O-acetyltransferase bENSDARG0000009878228


Protein motifs (from Interpro)
Interpro ID Name
 IPR000542  Acyltransferase ChoActase/COT/CPT


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA


Pathways (from Reactome)
Pathway description
Beta-oxidation of pristanoyl-CoA
Peroxisomal protein import


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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