ENSDARG00000062054


Danio rerio

Features
Gene ID: ENSDARG00000062054
  
Biological name :cpt1ab
  
Synonyms : carnitine palmitoyltransferase 1Ab (liver) / cpt1ab
  
Possible biological names infered from orthology : Carnitine O-palmitoyltransferase 1, liver isoform / carnitine palmitoyltransferase 1A / CPT1A / P50416 / P97742
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 23591990
Gene end: 23645806
  
Corresponding Affymetrix probe sets: Dr.4467.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000083632
Ensembl peptide - ENSDARP00000126355
NCBI entrez gene - 560000     See in Manteia.
RefSeq - XM_002666847
RefSeq - XM_021473873
swissprot - K7DY29
swissprot - E9QI17
ZFIN ID - ZDB-GENE-030131-3250
Ensembl - ENSDARG00000062054
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CPT1AENSGALG00000007077Gallus gallus
 CPT1AENSG00000110090Homo sapiens
 Cpt1aENSMUSG00000024900Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cpt1aa / carnitine palmitoyltransferase 1Aa (liver) / CPT1A* / P97742* / P50416* / carnitine palmitoyltransferase 1A* / Carnitine O-palmitoyltransferase 1, liver isoform *ENSDARG0000005977076
cpt1b / carnitine palmitoyltransferase 1B (muscle) / CPT1C* / Q92523* / Q8BGD5* / Q8TCG5* / Q924X2* / carnitine palmitoyltransferase 1C* / carnitine palmitoyltransferase 1B* / Carnitine O-p...ENSDARG0000005828566
cpt1cb / carnitine palmitoyltransferase 1CbENSDARG0000003794363
CABZ01055347.1ENSDARG0000006166060
crata / carnitine O-acetyltransferase a / CRAT* / P47934* / P43155* / carnitine acetyltransferase* / carnitine O-acetyltransferase*ENSDARG0000004024825
chata / B2ZGJ1 / choline O-acetyltransferase a / CHAT* / P28329* / choline O-acetyltransferase*ENSDARG0000001585424
crot / carnitine O-octanoyltransferase / Q9DC50* / Q9UKG9* / Peroxisomal carnitine O-octanoyltransferase *ENSDARG0000004035224
zgc:154046 / CRAT* / P43155* / P47934* / carnitine acetyltransferase* / carnitine O-acetyltransferase*ENSDARG0000001654524
cratb / carnitine O-acetyltransferase bENSDARG0000009878222


Protein motifs (from Interpro)
Interpro ID Name
 IPR000542  Acyltransferase ChoActase/COT/CPT
 IPR032476  Carnitine O-palmitoyltransferase, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA


Pathways (from Reactome)
Pathway description
Import of palmitoyl-CoA into the mitochondrial matrix
Signaling by Retinoic Acid


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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