ENSDARG00000041078


Danio rerio

Features
Gene ID: ENSDARG00000041078
  
Biological name :chka
  
Synonyms : chka / choline kinase alpha
  
Possible biological names infered from orthology : O54804 / P35790
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 21122818
Gene end: 21145374
  
Corresponding Affymetrix probe sets: Dr.13284.1.A1_at (Zebrafish Array)   Dr.13284.2.S1_at (Zebrafish Array)   NM_001044865_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000060014
Ensembl peptide - ENSDARP00000060183
NCBI entrez gene - 558499     See in Manteia.
RefSeq - NM_001044865
RefSeq Peptide - NP_001038330
swissprot - Q1LWF1
swissprot - Q1LWF2
ZFIN ID - ZDB-GENE-050208-149
Ensembl - ENSDARG00000041078
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHKAENSGALG00000036754Gallus gallus
 CHKAENSG00000110721Homo sapiens
 ChkaENSMUSG00000024843Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
chkb / choline kinase beta / Q9Y259* / O55229* / AC137513.1* / CHKB-CPT1B* / Choline/ethanolamine kinase * / CHKB-CPT1B readthrough (NMD candidate)*ENSDARG0000006316754
etnk2 / ethanolamine kinase 2 / A7MCT6* / Q9NVF9*ENSDARG0000007021328
etnk1 / ethanolamine kinase 1 / Q9D4V0* / Q9HBU6*ENSDARG0000001942026


Protein motifs (from Interpro)
Interpro ID Name
 IPR011009  Protein kinase-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND


Pathways (from Reactome)
Pathway description
Synthesis of PC
Synthesis of PE


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000041078 chka / choline kinase alpha / O54804* / P35790*  / complex
 ENSDARG00000063167 chkb / choline kinase beta / Q9Y259* / O55229* / AC137513.1* / CHKB-CPT1B* / Choline/ethanolamine kinase * / CHKB-CPT1B readthrough (NMD candidate)*  / complex






 

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