ENSDARG00000042147


Danio rerio

Features
Gene ID: ENSDARG00000042147
  
Biological name :rbbp5
  
Synonyms : rbbp5 / retinoblastoma binding protein 5
  
Possible biological names infered from orthology : Mus musculus retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit (Rbbp5), transcript variant 3, mRNA. / Q15291 / Q8BX09 / RB binding protein 5, histone lysine methyltransferase complex subunit
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 770001
Gene end: 784110
  
Corresponding Affymetrix probe sets: Dr.9817.1.S1_at (Zebrafish Array)   NM_200245_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000124318
Ensembl peptide - ENSDARP00000061774
NCBI entrez gene - 393215     See in Manteia.
RefSeq - NM_200245
RefSeq Peptide - NP_956539
swissprot - F8W3Y1
swissprot - F1QST7
ZFIN ID - ZDB-GENE-040426-886
Ensembl - ENSDARG00000042147
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RBBP5ENSGALG00000000668Gallus gallus
 RBBP5ENSG00000117222Homo sapiens
 Rbbp5ENSMUSG00000026439Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0048188 Set1C/COMPASS complex IEA


Pathways (from Reactome)
Pathway description
Formation of the beta-catenin:TCF transactivating complex
RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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