ENSGALG00000000668


Gallus gallus

Features
Gene ID: ENSGALG00000000668
  
Biological name :RBBP5
  
Synonyms : RB binding protein 5, histone lysine methyltransferase complex subunit / RBBP5
  
Possible biological names infered from orthology : Mus musculus retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit (Rbbp5), transcript variant 3, mRNA. / Q15291 / Q8BX09
  
Species: Gallus gallus
  
Chr. number: 26
Strand: -1
Band:
Gene start: 2002936
Gene end: 2012259
  
Corresponding Affymetrix probe sets: Gga.17072.1.S1_s_at (Chicken Array)   GgaAffx.11714.1.S1_at (Chicken Array)   GgaAffx.11714.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000000941
NCBI entrez gene - 419826     See in Manteia.
RefSeq - XM_015298923
RefSeq - NM_001030914
RefSeq - XM_015298921
RefSeq - XM_015298922
RefSeq Peptide - NP_001026085
swissprot - Q5ZLX3
Ensembl - ENSGALG00000000668
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbbp5ENSDARG00000042147Danio rerio
 RBBP5ENSG00000117222Homo sapiens
 Rbbp5ENSMUSG00000026439Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0043627 response to estrogen IEA
 biological_processGO:0051568 histone H3-K4 methylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0035097 histone methyltransferase complex IEA
 cellular_componentGO:0044666 MLL3/4 complex IEA
 cellular_componentGO:0048188 Set1C/COMPASS complex IEA
 cellular_componentGO:0071339 MLL1 complex IEA
 molecular_functionGO:0035064 methylated histone binding IEA
 molecular_functionGO:0042800 histone methyltransferase activity (H3-K4 specific) IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA


Pathways (from Reactome)
Pathway description
RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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