ENSDARG00000042751


Danio rerio

Features
Gene ID: ENSDARG00000042751
  
Biological name :riok3
  
Synonyms : riok3 / RIO kinase 3 (yeast)
  
Possible biological names infered from orthology : O14730 / Q9DBU3 / RIO kinase 3 / Serine/threonine-protein kinase RIO3
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 36239617
Gene end: 36253217
  
Corresponding Affymetrix probe sets: Dr.5464.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000062744
NCBI entrez gene - 445220     See in Manteia.
RefSeq - NM_001003614
RefSeq Peptide - NP_001003614
swissprot - F1QCP9
ZFIN ID - ZDB-GENE-040801-133
Ensembl - ENSDARG00000042751
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RIOK3ENSGALG00000015004Gallus gallus
 RIOK3ENSG00000101782Homo sapiens
 Riok3ENSMUSG00000024404Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
riok1 / RIO kinase 1 (yeast) / Q9BRS2* / Q922Q2* / RIO kinase 1* / Serine/threonine-protein kinase RIO1 *ENSDARG0000001639929


Protein motifs (from Interpro)
Interpro ID Name
 IPR000687  RIO kinase
 IPR011009  Protein kinase-like domain superfamily
 IPR017406  Serine/threonine-protein kinase Rio3
 IPR018935  RIO kinase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0004674 protein serine/threonine kinase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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