ENSMUSG00000024404


Mus musculus

Features
Gene ID: ENSMUSG00000024404
  
Biological name :Riok3
  
Synonyms : Q9DBU3 / Riok3 / Serine/threonine-protein kinase RIO3
  
Possible biological names infered from orthology : O14730 / RIO kinase 3
  
Species: Mus musculus
  
Chr. number: 18
Strand: 1
Band: A1
Gene start: 12128850
Gene end: 12157367
  
Corresponding Affymetrix probe sets: 10453900 (MoGene1.0st)   1415747_s_at (Mouse Genome 430 2.0 Array)   1419981_at (Mouse Genome 430 2.0 Array)   1422650_a_at (Mouse Genome 430 2.0 Array)   1460670_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000025270
NCBI entrez gene - 66878     See in Manteia.
MGI - MGI:1914128
RefSeq - NM_024182
RefSeq Peptide - NP_077144
swissprot - Q9DBU3
Ensembl - ENSMUSG00000024404
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 riok3ENSDARG00000042751Danio rerio
 RIOK3ENSGALG00000015004Gallus gallus
 RIOK3ENSG00000101782Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Riok1 / Q922Q2 / Serine/threonine-protein kinase RIO1 / Q9BRS2* / RIO kinase 1*ENSMUSG0000002142830


Protein motifs (from Interpro)
Interpro ID Name
 IPR000687  RIO kinase
 IPR011009  Protein kinase-like domain superfamily
 IPR017406  Serine/threonine-protein kinase Rio3
 IPR018935  RIO kinase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0030490 maturation of SSU-rRNA IEA
 biological_processGO:0032463 negative regulation of protein homooligomerization IEA
 biological_processGO:0032728 positive regulation of interferon-beta production IEA
 biological_processGO:0039534 negative regulation of MDA-5 signaling pathway IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0043124 negative regulation of I-kappaB kinase/NF-kappaB signaling IEA
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:0045089 positive regulation of innate immune response IEA
 biological_processGO:0051607 defense response to virus IEA
 biological_processGO:0071359 cellular response to dsRNA IEA
 biological_processGO:0098586 cellular response to virus IEA
 biological_processGO:1990786 cellular response to dsDNA IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0030688 preribosome, small subunit precursor IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity ISO
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0089720 caspase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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