ENSMUSG00000021428


Mus musculus

Features
Gene ID: ENSMUSG00000021428
  
Biological name :Riok1
  
Synonyms : Q922Q2 / Riok1 / Serine/threonine-protein kinase RIO1
  
Possible biological names infered from orthology : Q9BRS2 / RIO kinase 1
  
Species: Mus musculus
  
Chr. number: 13
Strand: 1
Band: A3.3
Gene start: 38036995
Gene end: 38061433
  
Corresponding Affymetrix probe sets: 10404630 (MoGene1.0st)   1419110_at (Mouse Genome 430 2.0 Array)   1425358_at (Mouse Genome 430 2.0 Array)   1440893_at (Mouse Genome 430 2.0 Array)   1449346_s_at (Mouse Genome 430 2.0 Array)   1459851_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000021866
Ensembl peptide - ENSMUSP00000153494
Ensembl peptide - ENSMUSP00000153217
Ensembl peptide - ENSMUSP00000153030
Ensembl peptide - ENSMUSP00000152922
NCBI entrez gene - 71340     See in Manteia.
MGI - MGI:1918590
RefSeq - XM_017315606
RefSeq - NM_024242
RefSeq Peptide - NP_077204
swissprot - A0A286YCL3
swissprot - A0A286YDE8
swissprot - A0A286YDM8
swissprot - Q922Q2
swissprot - A0A286YCS3
Ensembl - ENSMUSG00000021428
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 riok1ENSDARG00000016399Danio rerio
 RIOK1ENSGALG00000012795Gallus gallus
 RIOK1ENSG00000124784Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Riok3 / Q9DBU3 / Serine/threonine-protein kinase RIO3 / O14730* / RIO kinase 3*ENSMUSG0000002440427


Protein motifs (from Interpro)
Interpro ID Name
 IPR000687  RIO kinase
 IPR011009  Protein kinase-like domain superfamily
 IPR017407  Serine/threonine-protein kinase Rio1
 IPR018935  RIO kinase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0030490 maturation of SSU-rRNA IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0042274 ribosomal small subunit biogenesis IEA
 biological_processGO:2000234 positive regulation of rRNA processing IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0030688 preribosome, small subunit precursor IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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