ENSG00000124784


Homo sapiens

Features
Gene ID: ENSG00000124784
  
Biological name :RIOK1
  
Synonyms : Q9BRS2 / RIOK1 / RIO kinase 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: p24.3
Gene start: 7389496
Gene end: 7418037
  
Corresponding Affymetrix probe sets: 224450_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000418263
Ensembl peptide - ENSP00000369162
NCBI entrez gene - 83732     See in Manteia.
OMIM - 617753
RefSeq - XM_011514933
RefSeq - NM_031480
RefSeq - XM_005249446
RefSeq Peptide - NP_113668
swissprot - Q9BRS2
swissprot - E9PFQ8
Ensembl - ENSG00000124784
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 riok1ENSDARG00000016399Danio rerio
 RIOK1ENSGALG00000012795Gallus gallus
 Riok1ENSMUSG00000021428Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RIOK3 / O14730 / RIO kinase 3ENSG0000010178227


Protein motifs (from Interpro)
Interpro ID Name
 IPR000687  RIO kinase
 IPR011009  Protein kinase-like domain superfamily
 IPR017407  Serine/threonine-protein kinase Rio1
 IPR018935  RIO kinase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0030490 maturation of SSU-rRNA IMP
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0042274 ribosomal small subunit biogenesis IMP
 biological_processGO:2000234 positive regulation of rRNA processing IMP
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0030688 preribosome, small subunit precursor IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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