ENSDARG00000016399


Danio rerio

Features
Gene ID: ENSDARG00000016399
  
Biological name :riok1
  
Synonyms : riok1 / RIO kinase 1 (yeast)
  
Possible biological names infered from orthology : Q922Q2 / Q9BRS2 / RIO kinase 1 / Serine/threonine-protein kinase RIO1
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 21063660
Gene end: 21076570
  
Corresponding Affymetrix probe sets: Dr.3368.1.S1_at (Zebrafish Array)   NM_212995_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000127585
Ensembl peptide - ENSDARP00000022653
NCBI entrez gene - 406268     See in Manteia.
RefSeq - NM_212995
RefSeq Peptide - NP_998160
swissprot - B0UXW2
swissprot - X1WBJ4
ZFIN ID - ZDB-GENE-040426-1927
Ensembl - ENSDARG00000016399
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RIOK1ENSGALG00000012795Gallus gallus
 RIOK1ENSG00000124784Homo sapiens
 Riok1ENSMUSG00000021428Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
riok3 / RIO kinase 3 (yeast) / Q9DBU3* / O14730* / RIO kinase 3* / Serine/threonine-protein kinase RIO3 *ENSDARG0000004275126


Protein motifs (from Interpro)
Interpro ID Name
 IPR000687  RIO kinase
 IPR011009  Protein kinase-like domain superfamily
 IPR017407  Serine/threonine-protein kinase Rio1
 IPR018935  RIO kinase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0016310 phosphorylation IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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