ENSGALG00000012795


Gallus gallus

Features
Gene ID: ENSGALG00000012795
  
Biological name :RIOK1
  
Synonyms : RIOK1 / RIO kinase 1
  
Possible biological names infered from orthology : Q922Q2 / Q9BRS2 / Serine/threonine-protein kinase RIO1
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 64807397
Gene end: 64822203
  
Corresponding Affymetrix probe sets: Gga.12825.1.S1_at (Chicken Array)   Gga.9366.1.S1_a_at (Chicken Array)   Gga.9366.1.S1_x_at (Chicken Array)   Gga.9366.3.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020848
NCBI entrez gene - 420870     See in Manteia.
RefSeq - XM_015275999
RefSeq - XM_418958
swissprot - E1BWH5
Ensembl - ENSGALG00000012795
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 riok1ENSDARG00000016399Danio rerio
 RIOK1ENSG00000124784Homo sapiens
 Riok1ENSMUSG00000021428Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RIOK3 / RIO kinase 3 / O14730* / Q9DBU3* / Serine/threonine-protein kinase RIO3 *ENSGALG0000001500427


Protein motifs (from Interpro)
Interpro ID Name
 IPR000687  RIO kinase
 IPR011009  Protein kinase-like domain superfamily
 IPR017407  Serine/threonine-protein kinase Rio1
 IPR018935  RIO kinase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0030490 maturation of SSU-rRNA IEA
 biological_processGO:0042274 ribosomal small subunit biogenesis IEA
 biological_processGO:2000234 positive regulation of rRNA processing IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0030688 preribosome, small subunit precursor IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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