ENSDARG00000042887


Danio rerio

Features
Gene ID: ENSDARG00000042887
  
Biological name :LO017798.1
  
Synonyms : LO017798.1
  
Possible biological names infered from orthology : O14787 / Q99LG2 / TNPO2 / transportin 2 / transportin 2 (importin 3, karyopherin beta 2b)
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 54137089
Gene end: 54146461
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000062944
swissprot - E7F948
Ensembl - ENSDARG00000042887
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TNPO2ENSG00000105576Homo sapiens
 Tnpo2ENSMUSG00000031691Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tnpo2 / transportin 2 (importin 3, karyopherin beta 2b) / O14787* / Q99LG2* / transportin 2*ENSDARG0000003823993
tnpo1 / transportin 1 / Q92973*ENSDARG0000003539088
LO017722.1 / TNPO2* / O14787* / transportin 2*ENSDARG000001132960


Protein motifs (from Interpro)
Interpro ID Name
 IPR000357  HEAT repeat
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000060 protein import into nucleus, translocation IBA
 biological_processGO:0006607 NLS-bearing protein import into nucleus IBA
 biological_processGO:0006610 ribosomal protein import into nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0031965 nuclear membrane IBA
 cellular_componentGO:0034399 nuclear periphery IBA
 molecular_functionGO:0008139 nuclear localization sequence binding IBA
 molecular_functionGO:0008565 protein transporter activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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