ENSDARG00000042900


Danio rerio

Features
Gene ID: ENSDARG00000042900
  
Biological name :gtpbp1l
  
Synonyms : GTP binding protein 1, like / gtpbp1l
  
Possible biological names infered from orthology : GTP binding protein 1 / GTPBP1 / O00178 / O08582
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 14836040
Gene end: 14854420
  
Corresponding Affymetrix probe sets: Dr.6820.1.A1_at (Zebrafish Array)   NM_001024811_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000155870
Ensembl peptide - ENSDARP00000105786
NCBI entrez gene - 402863     See in Manteia.
RefSeq - NM_001024811
RefSeq Peptide - NP_001019982
swissprot - A3KQI1
ZFIN ID - ZDB-GENE-041007-2
Ensembl - ENSDARG00000042900
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GTPBP1ENSGALG00000030783Gallus gallus
 GTPBP1ENSG00000100226Homo sapiens
 Gtpbp1ENSMUSG00000042535Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gtpbp1 / GTP binding protein 1 / O00178* / O08582*ENSDARG0000005346780
gtpbp2b / GTP binding protein 2b / GTPBP2* / Q9BX10* / Q3UJK4* / GTP binding protein 2*ENSDARG0000007105941
AL929536.6ENSDARG000001157629
AL929536.7ENSDARG000001170004


Protein motifs (from Interpro)
Interpro ID Name
 IPR000795  Transcription factor, GTP-binding domain
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR009001  Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR035531  GTP binding protein 1-like, GTP-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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