ENSDARG00000053467


Danio rerio

Features
Gene ID: ENSDARG00000053467
  
Biological name :gtpbp1
  
Synonyms : GTP binding protein 1 / gtpbp1
  
Possible biological names infered from orthology : O00178 / O08582
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 33440615
Gene end: 33459764
  
Corresponding Affymetrix probe sets: Dr.515.1.A1_at (Zebrafish Array)   NM_213475_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000113119
NCBI entrez gene - 378721     See in Manteia.
RefSeq - NM_213475
RefSeq Peptide - NP_998640
swissprot - F1RBD1
ZFIN ID - ZDB-GENE-030909-12
Ensembl - ENSDARG00000053467
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GTPBP1ENSGALG00000030783Gallus gallus
 GTPBP1ENSG00000100226Homo sapiens
 Gtpbp1ENSMUSG00000042535Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gtpbp1l / GTP binding protein 1, like / GTPBP1* / O08582* / O00178* / GTP binding protein 1*ENSDARG0000004290078
gtpbp2b / GTP binding protein 2b / GTPBP2* / Q9BX10* / Q3UJK4* / GTP binding protein 2*ENSDARG0000007105939
AL929536.6ENSDARG000001157628
AL929536.7ENSDARG000001170004


Protein motifs (from Interpro)
Interpro ID Name
 IPR000795  Transcription factor, GTP-binding domain
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR009001  Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR035531  GTP binding protein 1-like, GTP-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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