ENSDARG00000043448


Danio rerio

Features
Gene ID: ENSDARG00000043448
  
Biological name :itm2ca
  
Synonyms : integral membrane protein 2Ca / itm2ca
  
Possible biological names infered from orthology : integral membrane protein 2C / Integral membrane protein 2C CT-BRI3 / ITM2C / Q91VK4 / Q9NQX7
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 40008370
Gene end: 40028883
  
Corresponding Affymetrix probe sets: Dr.6200.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000063782
swissprot - F1R640
ZFIN ID - ZDB-GENE-040718-284
Ensembl - ENSDARG00000043448
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ITM2CENSGALG00000036111Gallus gallus
 ITM2CENSG00000135916Homo sapiens
 Itm2cENSMUSG00000026223Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
itm2cb / integral membrane protein 2Cb / ITM2C* / Q91VK4* / Q9NQX7* / integral membrane protein 2C* / Integral membrane protein 2C CT-BRI3*ENSDARG0000003965064
itm2ba / integral membrane protein 2Ba / ITM2B* / O89051* / Q9Y287* / integral membrane protein 2B* / Integral membrane protein 2B BRI2, membrane form BRI2 intracellular domain BRI2C, solub...ENSDARG0000000709845
itm2bb / integral membrane protein 2Bb / ITM2B* / O89051* / Q9Y287* / integral membrane protein 2B* / Integral membrane protein 2B BRI2, membrane form BRI2 intracellular domain BRI2C, solub...ENSDARG0000004150544


Protein motifs (from Interpro)
Interpro ID Name
 IPR007084  BRICHOS domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007399 nervous system development IBA
 biological_processGO:0042985 negative regulation of amyloid precursor protein biosynthetic process IBA
 cellular_componentGO:0005794 Golgi apparatus IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0070062 extracellular exosome IBA
 molecular_functionGO:0001540 amyloid-beta binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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