ENSDARG00000043627


Danio rerio

Features
Gene ID: ENSDARG00000043627
  
Biological name :tbc1d9
  
Synonyms : tbc1d9 / TBC1 domain family, member 9 (with GRAM domain)
  
Possible biological names infered from orthology : Q5SVR0 / Q66K14 / TBC1D9B / TBC1 domain family member 9B
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 1365097
Gene end: 1392173
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000078232
Ensembl peptide - ENSDARP00000143661
NCBI entrez gene - 100332046     See in Manteia.
swissprot - A0A286Y906
swissprot - E7F7E8
ZFIN ID - ZDB-GENE-060810-33
Ensembl - ENSDARG00000043627
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TBC1D9BENSGALG00000005856Gallus gallus
 Q66K14ENSG00000197226Homo sapiens
 Q5SVR0ENSMUSG00000036644Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tbc1d9 / TBC1 domain family, member 9 (with GRAM domain) / Q3UYK3* / Q6ZT07* / TBC1 domain family member 9*ENSDARG0000005990066
B0R0W9 / TBC1D8B / si:dkey-110k5.6 / Q0IIM8* / A3KGB4* / TBC1 domain family member 8B*ENSDARG0000006219243
LO018176.1 / O95759* / TBC1D8* / TBC1 domain family member 8*ENSDARG0000010449337
tbc1d2b / TBC1 domain family, member 2B / Q3U0J8* / Q9UPU7*ENSDARG0000006198613
sgsm3 / Q7T2D0 / small G protein signaling modulator 3 / Q8VCZ6* / Q96HU1*ENSDARG0000001903812
tbc1d2 / TBC1 domain family, member 2 / B1AVH7* / Q9BYX2* / TBC1 domain family member 2A *ENSDARG0000007130412
tbc1d30 / TBC1 domain family, member 30 / Q69ZT9* / Q9Y2I9*ENSDARG0000007528112


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR002048  EF-hand domain
 IPR004182  GRAM domain
 IPR011992  EF-hand domain pair
 IPR011993  PH-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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