ENSMUSG00000036644


Mus musculus

Features
Gene ID: ENSMUSG00000036644
  
Biological name :Tbc1d9b
  
Synonyms : Q5SVR0 / Tbc1d9b / TBC1 domain family member 9B
  
Possible biological names infered from orthology : Q66K14
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B1.3
Gene start: 50131396
Gene end: 50172785
  
Corresponding Affymetrix probe sets: 10375679 (MoGene1.0st)   1428596_at (Mouse Genome 430 2.0 Array)   1428597_at (Mouse Genome 430 2.0 Array)   1459974_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000090825
Ensembl peptide - ENSMUSP00000098828
NCBI entrez gene - 76795     See in Manteia.
MGI - MGI:1924045
RefSeq - XM_006534458
RefSeq - NM_001290759
RefSeq - NM_001290760
RefSeq - NM_029745
RefSeq Peptide - NP_001277689
RefSeq Peptide - NP_084021
RefSeq Peptide - NP_001277688
swissprot - Q5SVR0
Ensembl - ENSMUSG00000036644
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbc1d9ENSDARG00000043627Danio rerio
 TBC1D9BENSGALG00000005856Gallus gallus
 Q66K14ENSG00000197226Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q3UYK3 / Tbc1d9 / TBC1 domain family member 9 / Q6ZT07*ENSMUSG0000003170963
Q9Z1A9 / Tbc1d8 / Mus musculus TBC1 domain family, member 8 (Tbc1d8), transcript variant 3, mRNA. / O95759* / TBC1 domain family member 8*ENSMUSG0000000313446
A3KGB4 / Tbc1d8b / TBC1 domain family member 8B / Q0IIM8*ENSMUSG0000004247346
Sgsm3 / Q8VCZ6 / Small G protein signaling modulator 3 / Q96HU1*ENSMUSG0000004230313
Q3U0J8 / Tbc1d2b / TBC1 domain family member 2B / Q9UPU7*ENSMUSG0000003741013
B1AVH7 / Tbc1d2 / TBC1 domain family member 2A / Q9BYX2* / TBC1 domain family member 2*ENSMUSG0000003981313
Q69ZT9 / Tbc1d30 / TBC1 domain family member 30 / Q9Y2I9*ENSMUSG0000005230211


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR002048  EF-hand domain
 IPR004182  GRAM domain
 IPR011992  EF-hand domain pair
 IPR011993  PH-like domain superfamily
 IPR035969  Rab-GTPase-TBC domain superfamily
 IPR036014  TCB1D9/TCB1D9B, PH-GRAM domain 1
 IPR036017  TCB1D9/TCB1D9B, PH-GRAM domain 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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