ENSMUSG00000003134


Mus musculus

Features
Gene ID: ENSMUSG00000003134
  
Biological name :Tbc1d8
  
Synonyms : Mus musculus TBC1 domain family, member 8 (Tbc1d8), transcript variant 3, mRNA. / Q9Z1A9 / Tbc1d8
  
Possible biological names infered from orthology : O95759 / TBC1 domain family member 8
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: B
Gene start: 39371492
Gene end: 39478755
  
Corresponding Affymetrix probe sets: 10354168 (MoGene1.0st)   1416996_at (Mouse Genome 430 2.0 Array)   1455683_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000141257
Ensembl peptide - ENSMUSP00000142143
Ensembl peptide - ENSMUSP00000141750
Ensembl peptide - ENSMUSP00000049967
NCBI entrez gene - 54610     See in Manteia.
MGI - MGI:1927225
RefSeq - XM_011238558
RefSeq - XM_017321765
RefSeq - XM_017321761
RefSeq - NM_001357522
RefSeq - NM_018775
RefSeq Peptide - NP_001344451
RefSeq Peptide - NP_061245
swissprot - Q9Z1A9
swissprot - A0A0A6YXU3
swissprot - A0A0A6YVT5
swissprot - A0A0A6YWY1
Ensembl - ENSMUSG00000003134
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LO018176.1ENSDARG00000104493Danio rerio
 TBC1D8ENSGALG00000016776Gallus gallus
 O95759ENSG00000204634Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A3KGB4 / Tbc1d8b / TBC1 domain family member 8B / Q0IIM8*ENSMUSG0000004247352
Q5SVR0 / Tbc1d9b / TBC1 domain family member 9B / Q66K14*ENSMUSG0000003664451
Q3UYK3 / Tbc1d9 / TBC1 domain family member 9 / Q6ZT07*ENSMUSG0000003170950
Q3U0J8 / Tbc1d2b / TBC1 domain family member 2B / Q9UPU7*ENSMUSG0000003741015
Sgsm3 / Q8VCZ6 / Small G protein signaling modulator 3 / Q96HU1*ENSMUSG0000004230314
B1AVH7 / Tbc1d2 / TBC1 domain family member 2A / Q9BYX2* / TBC1 domain family member 2*ENSMUSG0000003981314
Q69ZT9 / Tbc1d30 / TBC1 domain family member 30 / Q9Y2I9*ENSMUSG0000005230211


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR004182  GRAM domain
 IPR011992  EF-hand domain pair
 IPR035969  Rab-GTPase-TBC domain superfamily
 IPR036009  TBC1D8, PH-GRAM domain 1
 IPR036016  TBC1D8, PH-GRAM domain 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr