ENSMUSG00000042303


Mus musculus

Features
Gene ID: ENSMUSG00000042303
  
Biological name :Sgsm3
  
Synonyms : Q8VCZ6 / Sgsm3 / Small G protein signaling modulator 3
  
Possible biological names infered from orthology : Q96HU1
  
Species: Mus musculus
  
Chr. number: 15
Strand: 1
Band: E1
Gene start: 80977765
Gene end: 81012290
  
Corresponding Affymetrix probe sets: 10425477 (MoGene1.0st)   1432091_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000155595
Ensembl peptide - ENSMUSP00000155753
Ensembl peptide - ENSMUSP00000155794
Ensembl peptide - ENSMUSP00000115920
Ensembl peptide - ENSMUSP00000118050
Ensembl peptide - ENSMUSP00000122110
Ensembl peptide - ENSMUSP00000122543
Ensembl peptide - ENSMUSP00000155256
NCBI entrez gene - 105835     See in Manteia.
MGI - MGI:1916329
RefSeq - XM_017316358
RefSeq - XM_006520244
RefSeq - XM_006520245
RefSeq - XM_006520246
RefSeq - XM_006520247
RefSeq - XM_006520248
RefSeq - XM_006520249
RefSeq - NM_134091
RefSeq Peptide - NP_598852
swissprot - F6VZH1
swissprot - D3Z190
swissprot - D6RFR6
swissprot - Q3TP35
swissprot - Q8VCZ6
Ensembl - ENSMUSG00000042303
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sgsm3ENSDARG00000019038Danio rerio
 SGSM3ENSGALG00000012033Gallus gallus
 SGSM3ENSG00000100359Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9Z1A9 / Tbc1d8 / Mus musculus TBC1 domain family, member 8 (Tbc1d8), transcript variant 3, mRNA. / O95759* / TBC1 domain family member 8*ENSMUSG0000000313421
Q3UYK3 / Tbc1d9 / TBC1 domain family member 9 / Q6ZT07*ENSMUSG0000003170921
Q5SVR0 / Tbc1d9b / TBC1 domain family member 9B / Q66K14*ENSMUSG0000003664421
A3KGB4 / Tbc1d8b / TBC1 domain family member 8B / Q0IIM8*ENSMUSG0000004247320
B1AVH7 / Tbc1d2 / TBC1 domain family member 2A / Q9BYX2* / TBC1 domain family member 2*ENSMUSG0000003981319
Q3U0J8 / Tbc1d2b / TBC1 domain family member 2B / Q9UPU7*ENSMUSG0000003741017
Q69ZT9 / Tbc1d30 / TBC1 domain family member 30 / Q9Y2I9*ENSMUSG0000005230215


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR001452  SH3 domain
 IPR004012  RUN domain
 IPR035833  SGSM3, SH3 domain
 IPR035969  Rab-GTPase-TBC domain superfamily
 IPR036028  SH3-like domain superfamily
 IPR037213  RUN domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007050 cell cycle arrest IEA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0032483 regulation of Rab protein signal transduction IEA
 biological_processGO:0032486 Rap protein signal transduction IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0045732 positive regulation of protein catabolic process IDA
 biological_processGO:0048227 plasma membrane to endosome transport IEA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005921 gap junction IDA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0017137 Rab GTPase binding IEA
 molecular_functionGO:0030695 GTPase regulator activity NAS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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