ENSMUSG00000052302


Mus musculus

Features
Gene ID: ENSMUSG00000052302
  
Biological name :Tbc1d30
  
Synonyms : Q69ZT9 / Tbc1d30 / TBC1 domain family member 30
  
Possible biological names infered from orthology : Q9Y2I9
  
Species: Mus musculus
  
Chr. number: 10
Strand: -1
Band: D2
Gene start: 121263820
Gene end: 121351278
  
Corresponding Affymetrix probe sets: 10372831 (MoGene1.0st)   1430607_at (Mouse Genome 430 2.0 Array)   1439634_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000070488
Ensembl peptide - ENSMUSP00000151922
Ensembl peptide - ENSMUSP00000151497
NCBI entrez gene - 74694     See in Manteia.
MGI - MGI:1921944
RefSeq - NM_029057
RefSeq - XM_006514253
RefSeq Peptide - NP_083333
swissprot - A0A1W2P853
swissprot - Q69ZT9
swissprot - A0A1W2P726
Ensembl - ENSMUSG00000052302
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbc1d30ENSDARG00000075281Danio rerio
 TBC1D30ENSGALG00000009859Gallus gallus
 Q9Y2I9ENSG00000111490Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5SVR0 / Tbc1d9b / TBC1 domain family member 9B / Q66K14*ENSMUSG0000003664419
Q3UYK3 / Tbc1d9 / TBC1 domain family member 9 / Q6ZT07*ENSMUSG0000003170917
Q9Z1A9 / Tbc1d8 / Mus musculus TBC1 domain family, member 8 (Tbc1d8), transcript variant 3, mRNA. / O95759* / TBC1 domain family member 8*ENSMUSG0000000313417
A3KGB4 / Tbc1d8b / TBC1 domain family member 8B / Q0IIM8*ENSMUSG0000004247316
Sgsm3 / Q8VCZ6 / Small G protein signaling modulator 3 / Q96HU1*ENSMUSG0000004230315
B1AVH7 / Tbc1d2 / TBC1 domain family member 2A / Q9BYX2* / TBC1 domain family member 2*ENSMUSG0000003981312
Q3U0J8 / Tbc1d2b / TBC1 domain family member 2B / Q9UPU7*ENSMUSG0000003741011


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR032738  TBC1 domain family member 30, C-terminal
 IPR035969  Rab-GTPase-TBC domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0090630 activation of GTPase activity IBA
 biological_processGO:1902018 negative regulation of cilium assembly IEA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0036064 ciliary basal body IEA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0017137 Rab GTPase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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