ENSGALG00000005856


Gallus gallus

Features
Gene ID: ENSGALG00000005856
  
Biological name :TBC1D9B
  
Synonyms : TBC1D9B / TBC1 domain family member 9B
  
Possible biological names infered from orthology : Q5SVR0 / Q66K14
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 13440039
Gene end: 13457391
  
Corresponding Affymetrix probe sets: Gga.6227.1.S1_at (Chicken Array)   GgaAffx.26630.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009396
Ensembl peptide - ENSGALP00000054577
NCBI entrez gene - 416282     See in Manteia.
RefSeq - XM_414602
RefSeq - XM_004944952
swissprot - E1C2K7
swissprot - A0A1D5PNY1
Ensembl - ENSGALG00000005856
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbc1d9ENSDARG00000043627Danio rerio
 Q66K14ENSG00000197226Homo sapiens
 Q5SVR0ENSMUSG00000036644Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBC1D9 / TBC1 domain family member 9 / Q3UYK3* / Q6ZT07*ENSGALG0000000985565
TBC1D8 / TBC1 domain family member 8 / O95759* / Q9Z1A9* / Mus musculus TBC1 domain family, member 8 (Tbc1d8), transcript variant 3, mRNA.*ENSGALG0000001677646
TBC1D8B / TBC1 domain family member 8B / A3KGB4* / Q0IIM8*ENSGALG0000000904046
TBC1D2 / TBC1 domain family member 2 / B1AVH7* / Q9BYX2* / TBC1 domain family member 2A *ENSGALG0000000194413
TBC1D2B / TBC1 domain family member 2B / Q3U0J8* / Q9UPU7*ENSGALG0000000332213
SGSM3 / small G protein signaling modulator 3 / Q8VCZ6* / Q96HU1*ENSGALG0000001203312
TBC1D30 / TBC1 domain family member 30 / Q69ZT9* / Q9Y2I9*ENSGALG0000000985912


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR002048  EF-hand domain
 IPR004182  GRAM domain
 IPR011992  EF-hand domain pair


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr