ENSGALG00000001944


Gallus gallus

Features
Gene ID: ENSGALG00000001944
  
Biological name :TBC1D2
  
Synonyms : TBC1D2 / TBC1 domain family member 2
  
Possible biological names infered from orthology : B1AVH7 / Q9BYX2 / TBC1 domain family member 2A
  
Species: Gallus gallus
  
Chr. number: Z
Strand: -1
Band:
Gene start: 70527243
Gene end: 70548597
  
Corresponding Affymetrix probe sets: Gga.13947.1.S1_at (Chicken Array)   GgaAffx.11208.1.S1_at (Chicken Array)   GgaAffx.25329.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003005
NCBI entrez gene - 427374     See in Manteia.
RefSeq - XM_004949609
RefSeq - XM_004949610
RefSeq - XM_015280669
RefSeq - XM_015280670
RefSeq - XM_015280671
RefSeq - XM_015280672
RefSeq - XM_004949608
swissprot - F1NVC9
Ensembl - ENSGALG00000001944
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbc1d2ENSDARG00000071304Danio rerio
 Q9BYX2ENSG00000095383Homo sapiens
 B1AVH7ENSMUSG00000039813Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBC1D2B / TBC1 domain family member 2B / Q3U0J8* / Q9UPU7*ENSGALG0000000332236
TBC1D9B / TBC1 domain family member 9B / Q5SVR0* / Q66K14*ENSGALG0000000585617
TBC1D9 / TBC1 domain family member 9 / Q3UYK3* / Q6ZT07*ENSGALG0000000985517
TBC1D8 / TBC1 domain family member 8 / O95759* / Q9Z1A9* / Mus musculus TBC1 domain family, member 8 (Tbc1d8), transcript variant 3, mRNA.*ENSGALG0000001677617
TBC1D8B / TBC1 domain family member 8B / A3KGB4* / Q0IIM8*ENSGALG0000000904016
SGSM3 / small G protein signaling modulator 3 / Q8VCZ6* / Q96HU1*ENSGALG0000001203314
TBC1D30 / TBC1 domain family member 30 / Q69ZT9* / Q9Y2I9*ENSGALG0000000985911


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0017137 Rab GTPase binding IBA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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