ENSDARG00000043797


Danio rerio

Features
Gene ID: ENSDARG00000043797
  
Biological name :cdc5l
  
Synonyms : CDC5 cell division cycle 5-like (S. pombe) / cdc5l
  
Possible biological names infered from orthology : cell division cycle 5 like / Cell division cycle 5-like protein / Gm32717 / Gm32802 / Gm9040 / Gm9044 / Gm9045 / Gm9046 / Gm9048 / Gm9049 / predicted gene, 32717 / predicted gene, 32802 / predicted gene 9040 / predicted gene 9044 / predicted gene 9045 / predicted gene 9049 / Q6A068 / Q99459
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 5061135
Gene end: 5105922
  
Corresponding Affymetrix probe sets: Dr.10661.1.S1_at (Zebrafish Array)   NM_201084_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000064312
NCBI entrez gene - 394059     See in Manteia.
RefSeq - NM_201084
RefSeq Peptide - NP_957378
swissprot - E9QIC1
ZFIN ID - ZDB-GENE-040426-821
Ensembl - ENSDARG00000043797
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDC5LENSGALG00000016704Gallus gallus
 CDC5LENSG00000096401Homo sapiens
 Cdc5lENSMUSG00000023932Mus musculus
 Gm32717ENSMUSG00000112216Mus musculus
 Gm32802ENSMUSG00000112252Mus musculus
 Gm9040ENSMUSG00000112814Mus musculus
 Gm9044ENSMUSG00000112419Mus musculus
 Gm9045ENSMUSG00000112027Mus musculus
 Gm9046ENSMUSG00000112781Mus musculus
 Gm9048ENSMUSG00000112495Mus musculus
 Gm9049ENSMUSG00000112919Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR017930  Myb domain
 IPR021786  Pre-mRNA splicing factor component Cdc5p/Cef1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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