ENSGALG00000016704


Gallus gallus

Features
Gene ID: ENSGALG00000016704
  
Biological name :CDC5L
  
Synonyms : CDC5L / cell division cycle 5 like
  
Possible biological names infered from orthology : Cell division cycle 5-like protein / Gm32717 / Gm32802 / Gm9040 / Gm9044 / Gm9045 / Gm9046 / Gm9048 / Gm9049 / predicted gene, 32717 / predicted gene, 32802 / predicted gene 9040 / predicted gene 9044 / predicted gene 9045 / predicted gene 9049 / Q6A068 / Q99459
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 109326995
Gene end: 109358885
  
Corresponding Affymetrix probe sets: Gga.10444.1.S1_s_at (Chicken Array)   Gga.19042.1.S1_s_at (Chicken Array)   GgaAffx.25036.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000035905
NCBI entrez gene - 422052     See in Manteia.
RefSeq - XM_420058
swissprot - E1C6A9
Ensembl - ENSGALG00000016704
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cdc5lENSDARG00000043797Danio rerio
 CDC5LENSG00000096401Homo sapiens
 Cdc5lENSMUSG00000023932Mus musculus
 Gm32717ENSMUSG00000112216Mus musculus
 Gm32802ENSMUSG00000112252Mus musculus
 Gm9040ENSMUSG00000112814Mus musculus
 Gm9044ENSMUSG00000112419Mus musculus
 Gm9045ENSMUSG00000112027Mus musculus
 Gm9046ENSMUSG00000112781Mus musculus
 Gm9048ENSMUSG00000112495Mus musculus
 Gm9049ENSMUSG00000112919Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR017930  Myb domain
 IPR021786  Pre-mRNA splicing factor component Cdc5p/Cef1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0072422 signal transduction involved in DNA damage checkpoint IEA
 cellular_componentGO:0000974 Prp19 complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005662 DNA replication factor A complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0071007 U2-type catalytic step 2 spliceosome IEA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0001135 transcription factor activity, RNA polymerase II transcription factor recruiting IBA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA
 molecular_functionGO:0071987 WD40-repeat domain binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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