ENSDARG00000043970


Danio rerio

Features
Gene ID: ENSDARG00000043970
  
Biological name :lrpprc
  
Synonyms : leucine-rich pentatricopeptide repeat containing / lrpprc
  
Possible biological names infered from orthology : Leucine-rich PPR motif-containing protein, mitochondrial / P42704 / Q6PB66
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 10799380
Gene end: 10922808
  
Corresponding Affymetrix probe sets: Dr.1695.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000111776
NCBI entrez gene - 557195     See in Manteia.
RefSeq - NM_001142592
RefSeq Peptide - NP_001136064
swissprot - F5H8N4
ZFIN ID - ZDB-GENE-030131-7887
Ensembl - ENSDARG00000043970
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRPPRCENSGALG00000009967Gallus gallus
 LRPPRCENSG00000138095Homo sapiens
 LrpprcENSMUSG00000024120Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002885  Pentatricopeptide repeat
 IPR011990  Tetratricopeptide-like helical domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009451 RNA modification IBA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005739 mitochondrion IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0004519 endonuclease activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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