ENSGALG00000009967


Gallus gallus

Features
Gene ID: ENSGALG00000009967
  
Biological name :LRPPRC
  
Synonyms : leucine rich pentatricopeptide repeat containing / LRPPRC
  
Possible biological names infered from orthology : Leucine-rich PPR motif-containing protein, mitochondrial / P42704 / Q6PB66
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 25325348
Gene end: 25411188
  
Corresponding Affymetrix probe sets: Gga.1301.1.S1_at (Chicken Array)   GgaAffx.12848.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000037555
Ensembl peptide - ENSGALP00000061722
Ensembl peptide - ENSGALP00000056529
Ensembl peptide - ENSGALP00000016182
NCBI entrez gene - 421403     See in Manteia.
RefSeq - XM_001234902
swissprot - A0A1L1RSE0
swissprot - A0A1D5PUC6
swissprot - F1NGU3
swissprot - F1NX33
Ensembl - ENSGALG00000009967
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrpprcENSDARG00000043970Danio rerio
 LRPPRCENSG00000138095Homo sapiens
 LrpprcENSMUSG00000024120Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002885  Pentatricopeptide repeat
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR033490  Leucine-rich PPR motif-containing protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000961 negative regulation of mitochondrial RNA catabolic process IEA
 biological_processGO:0009451 RNA modification IBA
 biological_processGO:0070129 regulation of mitochondrial translation IEA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 cellular_componentGO:0000794 condensed nuclear chromosome IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0042645 mitochondrial nucleoid IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0003697 single-stranded DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004519 endonuclease activity IBA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA
 molecular_functionGO:0048487 beta-tubulin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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