ENSDARG00000043986


Danio rerio

Features
Gene ID: ENSDARG00000043986
  
Biological name :setd6
  
Synonyms : setd6 / SET domain containing 6
  
Possible biological names infered from orthology : N-lysine methyltransferase SETD6 / Q8TBK2 / Q9CWY3
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 17349265
Gene end: 17357165
  
Corresponding Affymetrix probe sets: Dr.20973.1.S1_at (Zebrafish Array)   NM_199600_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000064572
NCBI entrez gene - 322348     See in Manteia.
RefSeq - NM_199600
RefSeq Peptide - NP_955894
swissprot - F1QSN6
ZFIN ID - ZDB-GENE-030131-1067
Ensembl - ENSDARG00000043986
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SETD6ENSGALG00000002247Gallus gallus
 SETD6ENSG00000103037Homo sapiens
 Setd6ENSMUSG00000031671Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR011383  N-lysine methyltransferase SETD6
 IPR015353  Rubisco LSMT, substrate-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0018026 peptidyl-lysine monomethylation IEA
 molecular_functionGO:0016279 protein-lysine N-methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
PKMTs methylate histone lysines


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr