ENSDARG00000045025


Danio rerio

Features
Gene ID: ENSDARG00000045025
  
Biological name :ift52
  
Synonyms : ift52 / intraflagellar transport 52 homolog (Chlamydomonas)
  
Possible biological names infered from orthology : Intraflagellar transport / intraflagellar transport 52 / Q62559 / Q9Y366
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 1533097
Gene end: 1546015
  
Corresponding Affymetrix probe sets: Dr.15827.1.A1_at (Zebrafish Array)   NM_001001834_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000066190
NCBI entrez gene - 414931     See in Manteia.
RefSeq - NM_001001834
RefSeq Peptide - NP_001001834
swissprot - A8DZG0
ZFIN ID - ZDB-GENE-040614-3
Ensembl - ENSDARG00000045025
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IFT52ENSGALG00000003523Gallus gallus
 IFT52ENSG00000101052Homo sapiens
 Ift52ENSMUSG00000017858Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019196  ABC-type uncharacterised transport system
 IPR029062  Class I glutamine amidotransferase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042073 intraciliary transport IDA
 cellular_componentGO:0005930 axoneme IDA
 cellular_componentGO:0036064 ciliary basal body IDA


Pathways (from Reactome)
Pathway description
Hedgehog off state
Intraflagellar transport
Hedgehog on state


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism anterior-posterior axis curved , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr