ENSGALG00000003523


Gallus gallus

Features
Gene ID: ENSGALG00000003523
  
Biological name :IFT52
  
Synonyms : IFT52 / intraflagellar transport 52
  
Possible biological names infered from orthology : Intraflagellar transport / Q62559 / Q9Y366
  
Species: Gallus gallus
  
Chr. number: 20
Strand: -1
Band:
Gene start: 3780166
Gene end: 3792893
  
Corresponding Affymetrix probe sets: Gga.5715.1.S1_at (Chicken Array)   Gga.5715.1.S1_s_at (Chicken Array)   GgaAffx.11838.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044084
Ensembl peptide - ENSGALP00000063994
Ensembl peptide - ENSGALP00000062983
Ensembl peptide - ENSGALP00000060573
Ensembl peptide - ENSGALP00000052902
Ensembl peptide - ENSGALP00000005566
NCBI entrez gene - 419165     See in Manteia.
RefSeq - XM_015296351
RefSeq - NM_001006287
RefSeq - XM_015296350
RefSeq Peptide - NP_001006287
swissprot - A0A1D5NUR6
swissprot - A0A1L1RYR7
swissprot - Q5ZLJ9
swissprot - A0A1L1RVW5
swissprot - A0A1D5PJB0
Ensembl - ENSGALG00000003523
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ift52ENSDARG00000045025Danio rerio
 IFT52ENSG00000101052Homo sapiens
 Ift52ENSMUSG00000017858Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001841 neural tube formation IEA
 biological_processGO:0001947 heart looping IEA
 biological_processGO:0007224 smoothened signaling pathway IEA
 biological_processGO:0007368 determination of left/right symmetry IEA
 biological_processGO:0009953 dorsal/ventral pattern formation IEA
 biological_processGO:0035720 intraciliary anterograde transport IEA
 biological_processGO:0042733 embryonic digit morphogenesis IEA
 biological_processGO:0050680 negative regulation of epithelial cell proliferation IEA
 biological_processGO:0060271 cilium assembly IEA
 biological_processGO:0070613 regulation of protein processing IEA
 biological_processGO:1905515 non-motile cilium assembly IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0005814 centriole IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0030992 intraciliary transport particle B IEA
 cellular_componentGO:0032391 photoreceptor connecting cilium IEA
 cellular_componentGO:0044292 dendrite terminus IEA
 cellular_componentGO:0097542 ciliary tip IEA
 cellular_componentGO:0097546 ciliary base IEA


Pathways (from Reactome)
Pathway description
Hedgehog off state
Intraflagellar transport
Hedgehog on state


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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