ENSDARG00000045364


Danio rerio

Features
Gene ID: ENSDARG00000045364
  
Biological name :trappc3
  
Synonyms : trafficking protein particle complex 3 / trappc3
  
Possible biological names infered from orthology : O43617 / O55013
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 35722902
Gene end: 35733401
  
Corresponding Affymetrix probe sets: Dr.21964.1.A1_at (Zebrafish Array)   NM_001003601_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000066711
NCBI entrez gene - 445207     See in Manteia.
RefSeq - NM_001003601
RefSeq Peptide - NP_001003601
swissprot - Q1LUV8
ZFIN ID - ZDB-GENE-040801-120
Ensembl - ENSDARG00000045364
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5ZI57ENSGALG00000002284Gallus gallus
 O43617ENSG00000054116Homo sapiens
 O55013ENSMUSG00000028847Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007194  Transport protein particle (TRAPP) component
 IPR016721  Bet3 family
 IPR024096  NO signalling/Golgi transport ligand-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0048193 Golgi vesicle transport IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0030008 TRAPP complex IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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