ENSMUSG00000028847


Mus musculus

Features
Gene ID: ENSMUSG00000028847
  
Biological name :Trappc3
  
Synonyms : O55013 / trafficking protein particle complex 3 / Trappc3
  
Possible biological names infered from orthology : O43617
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: D2.2
Gene start: 126262325
Gene end: 126275883
  
Corresponding Affymetrix probe sets: 10508135 (MoGene1.0st)   1416771_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000030660
NCBI entrez gene - 27096     See in Manteia.
MGI - MGI:1351486
RefSeq - NM_013718
RefSeq Peptide - NP_038746
swissprot - O55013
swissprot - Q3U9K9
Ensembl - ENSMUSG00000028847
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trappc3ENSDARG00000045364Danio rerio
 Q5ZI57ENSGALG00000002284Gallus gallus
 O43617ENSG00000054116Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q4KL14 / Trappc3l / Trafficking protein particle complex subunit 3-like protein / Q5T215* / trafficking protein particle complex 3 like*ENSMUSG0000007134058


Protein motifs (from Interpro)
Interpro ID Name
 IPR007194  Transport protein particle (TRAPP) component
 IPR016721  Bet3 family
 IPR024096  NO signalling/Golgi transport ligand-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IDA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0048193 Golgi vesicle transport IEA
 cellular_componentGO:0000139 Golgi membrane IDA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus ISO
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0030008 TRAPP complex ISO
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr